RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 NEURL1BA8MQ27 555 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ERVV-2B6SEH9 535 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PSMD11O00231 422 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 CLDN3O15551 220 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 EDF1O60869 148 aaKnown RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 RAB25P57735 213 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PLIN5Q00G26 463 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 DPYSQ14117 519 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 DRAP1Q14919 205 aaPredicted RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PDPK2PQ6A1A2 396 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ZNF544Q6NX49 715 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 DNAJC24Q6P3W2 148 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 TPTE2Q6XPS3 522 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 SGMS1Q86VZ5 419 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 CCDC24Q8N4L8 307 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 SYTL5Q8TDW5 730 aaPredicted RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 C19orf60Q96EN9 201 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 TMEM109Q9BVC6 243 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 CCSER1Q9C0I3 900 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 GTSE1Q9NYZ3 720 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 LNPEPQ9UIQ6 1025 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PSMD13Q9UNM6 376 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 A0A0U1RQJ8 604 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 TSPAN4O14817 238 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 TM7SF2O76062 418 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ME2P23368 584 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ATXN3P54252 364 aaPredicted RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ABCE1P61221 599 aaKnown RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 DYNLT1P63172 113 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PUDPQ08623 228 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 RRP1BQ14684 758 aaKnown RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PUM3Q15397 648 aaKnown RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ITSN1Q15811 1721 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 VPS72Q15906 364 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 SPDYAQ5MJ70 313 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 EMC10Q5UCC4 262 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ABRAXAS1Q6UWZ7 409 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 CCDC81Q6ZN84 652 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PDZD4Q76G19 769 aaPredicted RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ZNF572Q7Z3I7 529 aaPredicted RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 CLNKQ7Z7G1 428 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 KBTBD2Q8IY47 623 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PM20D2Q8IYS1 436 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PQLC1Q8N2U9 271 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 DHRSXQ8N5I4 330 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PLBD2Q8NHP8 589 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 MYO3BQ8WXR4 1341 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 RORBQ92753 470 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 KRT35Q92764 455 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PROX1Q92786 737 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 PHF21AQ96BD5 680 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 MTERF3Q96E29 417 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 AGBL1Q96MI9 1066 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 FRMD8Q9BZ67 464 aaPredicted RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 TRIM8Q9BZR9 551 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 KLHL31Q9H511 634 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 COPS7BQ9H9Q2 264 aaPredicted RBP5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ABCB10Q9NRK6 738 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 KIAA1024Q9UPX6 916 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ERVK-11Q9UQG0 969 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ALG6Q9Y672 507 aa5.34□□□□□ -1.55
SCN11A-202ENST00000444237 ADAMTSL3P82987 1691 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 LRRC7Q96NW7 1537 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 CRB1P82279 1406 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 hCG_1984214I3L0E3 225 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 APOL1O14791 398 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 H2AFYO75367 372 aaKnown RBP5.34□□□□□ -1.56
SCN11A-202ENST00000444237 CALB1P05937 261 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 WEE2P0C1S8 567 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 UCHL3P15374 230 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 CCNCP24863 283 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 FASP25445 335 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 VAC14Q08AM6 782 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 RIPPLY1Q0D2K3 151 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 TOP3AQ13472 1001 aaPredicted RBP5.34□□□□□ -1.56
SCN11A-202ENST00000444237 CTTNQ14247 550 aaKnown RBP5.34□□□□□ -1.56
SCN11A-202ENST00000444237 TAF12Q16514 161 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 NSMFQ6X4W1 530 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 FASTKD5Q7L8L6 764 aaKnown RBP5.34□□□□□ -1.56
SCN11A-202ENST00000444237 C16orf62Q7Z3J2 963 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF354CQ86Y25 554 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 CAMK1DQ8IU85 385 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 SFRP1Q8N474 314 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 POU5F2Q8N7G0 328 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 ZNF713Q8N859 430 aaPredicted RBP5.34□□□□□ -1.56
SCN11A-202ENST00000444237 ENKURQ8TC29 256 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 IRGQQ8WZA9 623 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 NCLNQ969V3 563 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 SNX27Q96L92 541 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 AGPAT1Q99943 283 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 C7orf25Q9BPX7 421 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 SENP7Q9BQF6 1050 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 VTA1Q9NP79 307 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 FKBP14Q9NWM8 211 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 NKX1-2Q9UD57 310 aaPredicted RBP5.34□□□□□ -1.56
SCN11A-202ENST00000444237 NAGPAQ9UK23 515 aa5.34□□□□□ -1.56
SCN11A-202ENST00000444237 MST1RQ04912 1400 aa5.33□□□□□ -1.56
SCN11A-202ENST00000444237 UTYO14607 1347 aa5.33□□□□□ -1.56
SCN11A-202ENST00000444237 FAM237AA0A1B0GTK4 181 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms