RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 AP1G2O75843 785 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 OR4Q2P0C623 313 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 RHOXF2BP0C7M4 288 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 FAM200BP0CF97 657 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 TYMPP19971 482 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 PSMA2P25787 234 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 SLC1A1P43005 524 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 PLA2G4AP47712 749 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 LLGL1Q15334 1064 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 LRRTM3Q86VH5 581 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 LRRC43Q8N309 656 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 RASGEF1CQ8N431 466 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 RHOXF2Q9BQY4 288 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 ACBD6Q9BR61 282 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 MRPL9Q9BYD2 267 aaKnown RBP20.09■□□□□ 0.81
SNX17-203ENST00000440760 KLHL11Q9NVR0 708 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 ADAM28Q9UKQ2 775 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 PTPRSQ13332 1948 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 XPO1O14980 1071 aaKnown RBP20.08■□□□□ 0.81
SNX17-203ENST00000440760 FGGP02679 453 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 PYGMP11217 842 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 FLT3P36888 993 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 MRPS25P82663 173 aaKnown RBP20.08■□□□□ 0.81
SNX17-203ENST00000440760 PLCB3Q01970 1234 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 ADAT2Q7Z6V5 191 aaKnown RBP20.08■□□□□ 0.81
SNX17-203ENST00000440760 ACTRT1Q8TDG2 376 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 STK32AQ8WU08 396 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 BCL7CQ8WUZ0 217 aaPredicted RBP20.08■□□□□ 0.81
SNX17-203ENST00000440760 PKMYT1Q99640 499 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 AP1M1Q9BXS5 423 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 GPR62Q9BZJ7 368 aa20.08■□□□□ 0.81
SNX17-203ENST00000440760 PAX3P23760 479 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 MAN1A1P33908 653 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 ADIGQ0VDE8 80 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 CEP57Q86XR8 500 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 SPATA18Q8TC71 538 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 NDRG1Q92597 394 aaKnown RBP20.08■□□□□ 0.8
SNX17-203ENST00000440760 KCNK16Q96T55 309 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 SMOQ99835 787 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.08■□□□□ 0.82e-6■■■□□ 17.8
SNX17-203ENST00000440760 RNF14Q9UBS8 474 aa20.08■□□□□ 0.8
SNX17-203ENST00000440760 LAMA2P24043 3122 aaKnown RBP20.08■□□□□ 0.8
SNX17-203ENST00000440760 RWDD2BP57060 319 aa20.07■□□□□ 0.8
SNX17-203ENST00000440760 TXNRD3NBQ6F5E7 133 aa20.07■□□□□ 0.8
SNX17-203ENST00000440760 CC2D1AQ6P1N0 951 aaPredicted RBP20.07■□□□□ 0.8
SNX17-203ENST00000440760 THEM5Q8N1Q8 247 aa20.07■□□□□ 0.8
SNX17-203ENST00000440760 ZMIZ2Q8NF64 920 aa20.07■□□□□ 0.8
SNX17-203ENST00000440760 ACSF2Q96CM8 615 aaPredicted RBP20.07■□□□□ 0.8
SNX17-203ENST00000440760 TMEM59LQ9UK28 342 aa20.07■□□□□ 0.8
SNX17-203ENST00000440760 FAN1Q9Y2M0 1017 aa20.07■□□□□ 0.8
SNX17-203ENST00000440760 DGKIO75912 1065 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 GALTP07902 379 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 RPL34P49207 117 aaKnown RBP20.06■□□□□ 0.8
SNX17-203ENST00000440760 SLC6A3Q01959 620 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 RAB6CQ53S08 254 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 FAM171A1Q5VUB5 890 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 MFSD5Q6N075 450 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 FAM171BQ6P995 826 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 GPRIN1Q7Z2K8 1008 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 UBE2Q1Q7Z7E8 422 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 ARFGAP1Q8N6T3 406 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 KHSRPQ92945 711 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNX17-203ENST00000440760 RPGRIP1Q96KN7 1286 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 RAB6CQ9H0N0 254 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 ARHGEF37A1IGU5 675 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 ALDH2P05091 517 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 BDNFP23560 247 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 SLC8A3P57103 927 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 TSPY1Q01534 308 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 PIGHQ14442 188 aaPredicted RBP20.06■□□□□ 0.8
SNX17-203ENST00000440760 C15orf59Q2T9L4 293 aaPredicted RBP20.06■□□□□ 0.8
SNX17-203ENST00000440760 GLIPR1L2Q4G1C9 344 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 ATP13A4Q4VNC1 1196 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 VARS2Q5ST30 1063 aaKnown RBP20.06■□□□□ 0.8
SNX17-203ENST00000440760 SH3PXD2AQ5TCZ1 1133 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 FUT10Q6P4F1 479 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 FAM43BQ6ZT52 329 aaPredicted RBP20.06■□□□□ 0.8
SNX17-203ENST00000440760 RHOT1Q8IXI2 618 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 NIPA2Q8N8Q9 360 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 RXFP2Q8WXD0 754 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 ANKZF1Q9H8Y5 726 aa20.06■□□□□ 0.8
SNX17-203ENST00000440760 C2CD4BA6NLJ0 364 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 PSTPIP1O43586 416 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 TRAPPC3O43617 180 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 LRCH4O75427 683 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 NDUFV1P49821 464 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 WDR5P61964 334 aaKnown RBP20.05■□□□□ 0.8
SNX17-203ENST00000440760 CDO1Q16878 200 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 KCTD19Q17RG1 926 aaPredicted RBP20.05■□□□□ 0.8
SNX17-203ENST00000440760 LONRF2Q1L5Z9 754 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 SEL1L2Q5TEA6 688 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 TMEM199Q8N511 208 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 FNIP1Q8TF40 1166 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 SMARCD1Q96GM5 515 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 HSFY1Q96LI6 401 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 CFAP57Q96MR6 1250 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 COLEC11Q9BWP8 271 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 NR2E1Q9Y466 385 aa20.05■□□□□ 0.8
SNX17-203ENST00000440760 ABHD14A-ACY1A0A1B0GW23 586 aa20.04■□□□□ 0.8
SNX17-203ENST00000440760 GPD1P21695 349 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms