RNA–Protein interactions for RNA: ENST00000435425.1

SHH-203, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-203ENST00000435425 ZFP14Q9HCL3 533 aa19.78■□□□□ 0.76
SHH-203ENST00000435425 TRPC7Q9HCX4 862 aa19.78■□□□□ 0.76
SHH-203ENST00000435425 UBE2TQ9NPD8 197 aaPredicted RBP19.78■□□□□ 0.76
SHH-203ENST00000435425 TAB2Q9NYJ8 693 aa19.78■□□□□ 0.76
SHH-203ENST00000435425 BDP1A6H8Y1 2624 aa19.78■□□□□ 0.76
SHH-203ENST00000435425 ANAPC1Q9H1A4 1944 aa19.78■□□□□ 0.76
SHH-203ENST00000435425 NUP210Q8TEM1 1887 aaPredicted RBP19.77■□□□□ 0.76
SHH-203ENST00000435425 CFHP08603 1231 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 FCARP24071 287 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 MYL5Q02045 173 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 APBA1Q02410 837 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 EXOC3L4Q17RC7 722 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 TXNDC8Q6A555 127 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 GJB7Q6PEY0 223 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 ARID3BQ8IVW6 561 aaPredicted RBP19.77■□□□□ 0.76
SHH-203ENST00000435425 UBR7Q8N806 425 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 ZMIZ2Q8NF64 920 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 CEP295NLQ96MC4 621 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 SLC46A2Q9BY10 475 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 DUSP12Q9UNI6 340 aa19.77■□□□□ 0.76
SHH-203ENST00000435425 MYO16Q9Y6X6 1858 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 SYCE3A1L190 88 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 ECI2O75521 394 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 TADA3O75528 432 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 ABL1P00519 1130 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 ACO1P21399 889 aaKnown RBP19.76■□□□□ 0.75
SHH-203ENST00000435425 EEF1GP26641 437 aaKnown RBP19.76■□□□□ 0.75
SHH-203ENST00000435425 SIGLEC14Q08ET2 396 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 GRM2Q14416 872 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 MIIPQ5JXC2 388 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 TRIM65Q6PJ69 517 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 CLEC20AQ6ZU45 233 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 AOPEPQ8N6M6 819 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 SCAMP5Q8TAC9 235 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 ELSPBP1Q96BH3 223 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 KREMEN1Q96MU8 473 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 C1QTNF1Q9BXJ1 281 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 SMG9Q9H0W8 520 aaKnown RBP19.76■□□□□ 0.75
SHH-203ENST00000435425 VPS16Q9H269 839 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 FAM124BQ9H5Z6 455 aaPredicted RBP19.76■□□□□ 0.75
SHH-203ENST00000435425 EHD2Q9NZN4 543 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 FBXL21Q9UKT6 434 aa19.76■□□□□ 0.75
SHH-203ENST00000435425 PATJQ8NI35 1801 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 TMEM221A6NGB7 291 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 RNF225M0QZC1 329 aaPredicted RBP19.75■□□□□ 0.75
SHH-203ENST00000435425 M0R296 226 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 DPYSL4O14531 572 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 RTN3O95197 1032 aaPredicted RBP19.75■□□□□ 0.75
SHH-203ENST00000435425 LETM1O95202 739 aaPredicted RBP19.75■□□□□ 0.75
SHH-203ENST00000435425 CALCAP01258 141 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 SRFP11831 508 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 KRT5P13647 590 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 PON1P27169 355 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 YWHAQP27348 245 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 SLC5A3P53794 718 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 GPC5P78333 572 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 GCNT1Q02742 428 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 TAF10Q12962 218 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 ARHGAP44Q17R89 818 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 SGO2Q562F6 1265 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 TMEM31Q5JXX7 168 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 CDKAL1Q5VV42 579 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 RBBP8NLQ8NC74 664 aaPredicted RBP19.75■□□□□ 0.75
SHH-203ENST00000435425 FBXO32Q969P5 355 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 TTLL2Q9BWV7 592 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 NAT10Q9H0A0 1025 aaKnown RBP19.75■□□□□ 0.75
SHH-203ENST00000435425 CSNK1G1Q9HCP0 422 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 C11orf16Q9NQ32 467 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 TRPM5Q9NZQ8 1165 aa19.75■□□□□ 0.75
SHH-203ENST00000435425 GTPBP10A4D1E9 387 aaKnown RBP19.74■□□□□ 0.75
SHH-203ENST00000435425 HEPACAM2A8MVW5 462 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 TNFRSF10BO14763 440 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 TPM2P07951 284 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 VDRP11473 427 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 CDK11BP21127 795 aaKnown RBP19.74■□□□□ 0.75
SHH-203ENST00000435425 MFAP3P55082 362 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 KRT31Q15323 416 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 GOLGA7BQ2TAP0 167 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 VITQ6UXI7 678 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 CMTM8Q8IZV2 173 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 TTC16Q8NEE8 873 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 RSPRY1Q96DX4 576 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 SLITRK1Q96PX8 696 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 CYP2S1Q96SQ9 504 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 DUSP16Q9BY84 665 aa19.74■□□□□ 0.75
SHH-203ENST00000435425 CHORDC1Q9UHD1 332 aaPredicted RBP19.74■□□□□ 0.75
SHH-203ENST00000435425 CUL9Q8IWT3 2517 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 C2orf78A6NCI8 922 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 PRAMEF12O95522 483 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 NPR3P17342 541 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 DDX6P26196 483 aaKnown RBP eCLIP19.73■□□□□ 0.75
SHH-203ENST00000435425 AVPR1AP37288 418 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 USP8P40818 1118 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 SKOR2Q2VWA4 1001 aaPredicted RBP19.73■□□□□ 0.75
SHH-203ENST00000435425 ARHGAP17Q68EM7 881 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 GPRIN1Q7Z2K8 1008 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 MON1AQ86VX9 555 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 TRPV4Q9HBA0 871 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 APEX2Q9UBZ4 518 aa19.73■□□□□ 0.75
SHH-203ENST00000435425 CA14Q9ULX7 337 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms