RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 SSTR1P30872 391 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 MYO1EQ12965 1108 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 TFDP1Q14186 410 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 SETDB1Q15047 1291 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 PARP6Q2NL67 630 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 SMTNL2Q2TAL5 461 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 GPRC5AQ8NFJ5 357 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 LRRC8CQ8TDW0 803 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 MZB1Q8WU39 189 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 NSMCE1Q8WV22 266 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 C10orf82Q8WW14 230 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 MRRFQ96E11 262 aaKnown RBP14.97□□□□□ -0.01
LIG1-202ENST00000427526 MS4A4AQ96JQ5 239 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 ADAM33Q9BZ11 813 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 BTBD19C9JJ37 291 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 LGR5O75473 907 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 GJB1P08034 283 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 KRT7P08729 469 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 T-ENOLP0DO92 83 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 RPL22P35268 128 aaKnown RBP14.97□□□□□ -0.01
LIG1-202ENST00000427526 DYNLT1P63172 113 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 TRPC3Q13507 836 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 SURF1Q15526 300 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 KCNT1Q5JUK3 1230 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 ARMCX2Q7L311 632 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 TTC13Q8NBP0 860 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 PYROXD1Q8WU10 500 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 ZNF75CPQ92670 426 aaPredicted RBP14.97□□□□□ -0.01
LIG1-202ENST00000427526 ZWILCHQ9H900 591 aa14.97□□□□□ -0.01
LIG1-202ENST00000427526 ZWINTO95229 277 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 ARL4CP56559 192 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 YWHAEP62258 255 aaKnown RBP14.96□□□□□ -0.01
LIG1-202ENST00000427526 EFTUD2Q15029 972 aaKnown RBP eCLIP14.96□□□□□ -0.011e-6■■■■■ 30.3
LIG1-202ENST00000427526 ZNF699Q32M78 642 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 IER5Q5VY09 327 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 LVRNQ6Q4G3 990 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 SCARA5Q6ZMJ2 495 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 C3orf62Q6ZUJ4 267 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 THNSL1Q8IYQ7 743 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 ACSS3Q9H6R3 686 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 NOP53Q9NZM5 478 aaKnown RBP14.96□□□□□ -0.01
LIG1-202ENST00000427526 CCL15-CCL14A0A0B4J2E2 113 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 RPSAP08865 295 aaKnown RBP14.96□□□□□ -0.01
LIG1-202ENST00000427526 CD48P09326 243 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 PROZP22891 400 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 TFAMQ00059 246 aaKnown RBP14.96□□□□□ -0.01
LIG1-202ENST00000427526 LAMTOR4Q0VGL1 99 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 CCL15Q16663 113 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 OTOAQ7RTW8 1153 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 ATP11CQ8NB49 1132 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 FAM167AQ96KS9 214 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 PTPRHQ9HD43 1115 aa14.96□□□□□ -0.01
LIG1-202ENST00000427526 TCRBV7S3A2A0A539 114 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 DCTN3O75935 186 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 WFS1O76024 890 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 ADORA2AP29274 412 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 POLR2BP30876 1174 aaKnown RBP14.95□□□□□ -0.02
LIG1-202ENST00000427526 PHBP35232 272 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 BIRC2Q13490 618 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 HHATQ5VTY9 493 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 PLPPR4Q7Z2D5 763 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 RNF149Q8NC42 400 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 SHCBP1Q8NEM2 672 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 BRI3BPQ8WY22 251 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 TMEM237Q96Q45 408 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 RAB3IPQ96QF0 476 aaPredicted RBP14.95□□□□□ -0.02
LIG1-202ENST00000427526 MCM3APO60318 1980 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 B4GALT4O60513 344 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 PRKCBP05771 671 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 ALDH3A1P30838 453 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 LACTBP83111 547 aaPredicted RBP14.95□□□□□ -0.02
LIG1-202ENST00000427526 TTLL4Q14679 1199 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 SPDYAQ5MJ70 313 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 RHPN2Q8IUC4 686 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 UNC45BQ8IWX7 931 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 CMASQ8NFW8 434 aaPredicted RBP14.95□□□□□ -0.02
LIG1-202ENST00000427526 SLC7A6OSQ96CW6 309 aaPredicted RBP14.95□□□□□ -0.02
LIG1-202ENST00000427526 CPXM1Q96SM3 734 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 PAFAH2Q99487 392 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 RNPEPQ9H4A4 650 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 HAO1Q9UJM8 370 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 POLIQ9UNA4 740 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 TMEM63AO94886 807 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 TARSP26639 723 aaKnown RBP14.95□□□□□ -0.02
LIG1-202ENST00000427526 ATP11AP98196 1134 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 MAPK6Q16659 721 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 HADHQ16836 314 aaKnown RBP14.95□□□□□ -0.02
LIG1-202ENST00000427526 TSHZ1Q6ZSZ6 1077 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 XYLT1Q86Y38 959 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 FBXO36Q8NEA4 188 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 DCAKDQ8WVC6 231 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 INPP5DQ92835 1189 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 PPME1Q9Y570 386 aa14.95□□□□□ -0.02
LIG1-202ENST00000427526 LRRC37A2A6NM11 1700 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 IGKV6-21A0A0C4DH24 114 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 ASB14A6NK59 587 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 PIAS1O75925 651 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 CCNG1P51959 295 aa14.94□□□□□ -0.02
LIG1-202ENST00000427526 PSMC1P62191 440 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms