RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 BTKQ06187 659 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 STK3Q13188 491 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 PMS2P11Q13670 270 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 BOP1Q14137 746 aaKnown RBP2.94□□□□□ -1.94
PTPRC-208ENST00000427110 SLC29A2Q14542 456 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 CCDC142Q17RM4 750 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 ARL13BQ3SXY8 428 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 C10orf62Q5T681 223 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-208ENST00000427110 TSTD2Q5T7W7 516 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 RRAGBQ5VZM2 374 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 KAZNQ674X7 775 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 HIBCHQ6NVY1 386 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-208ENST00000427110 VWA1Q6PCB0 445 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 TMEM108Q6UXF1 575 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 UNC13DQ70J99 1090 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 YAF2Q8IY57 180 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 TXLNBQ8N3L3 684 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 OR56A3Q8NH54 315 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 CAGE1Q8TC20 777 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 POC1BQ8TC44 478 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 MORC4Q8TE76 937 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 ZNF384Q8TF68 577 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 KIAA1191Q96A73 305 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 LRRC46Q96FV0 321 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 PDLIM2Q96JY6 352 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 PPP1R9BQ96SB3 815 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 HEPHQ9BQS7 1158 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 TPSD1Q9BZJ3 242 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 FNIP2Q9P278 1114 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 TAGLN3Q9UI15 199 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 MID2Q9UJV3 735 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 PADI4Q9UM07 663 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 MAGED2Q9UNF1 606 aaPredicted RBP2.94□□□□□ -1.94
PTPRC-208ENST00000427110 ST3GAL5Q9UNP4 418 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 TBC1D30Q9Y2I9 924 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 LRCH1Q9Y2L9 728 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 PCDHGB2Q9Y5G2 931 aa2.94□□□□□ -1.94
PTPRC-208ENST00000427110 A0A0B4J269 797 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 LINC00473A8K010 186 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 F5H423 210 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 hCG_1984214I3L0E3 225 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 DCLK1O15075 740 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 TPD52L2O43399 206 aaKnown RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 RGS10O43665 173 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 RASAL1O95294 804 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 MT-ND5P03915 603 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 PDHA1P08559 390 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 SRGNP10124 158 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 HARSP12081 509 aaKnown RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 FGFR2P21802 821 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ACVR2AP27037 513 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 IL1R2P27930 398 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 CD6P30203 668 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 LRPAP1P30533 357 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 FOLR3P41439 243 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 HTR3AP46098 478 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ZNF134P52741 427 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 CHAF1AQ13111 956 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 TUBB3Q13509 450 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 MORC3Q14149 939 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ARHGEF7Q14155 803 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 HLXQ14774 488 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 TXNRD1Q16881 649 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 INSCQ1MX18 579 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 PLA1AQ53H76 456 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 AKNAD1Q5T1N1 836 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 RBM20Q5T481 1227 aaKnown RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ARHGAP40Q5TG30 622 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 IZUMO3Q5VZ72 239 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 FBXO38Q6PIJ6 1188 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 TOGARAM2Q6ZUX3 1019 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 MICALCLQ6ZW33 695 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 AMIGO2Q86SJ2 522 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ZNF280BQ86YH2 543 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 FAM9AQ8IZU1 332 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 SPICE1Q8N0Z3 855 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 SDR16C5Q8N3Y7 309 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ENAHQ8N8S7 591 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ATP11CQ8NB49 1132 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 FANCBQ8NB91 859 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 B3GALNT2Q8NCR0 500 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 CCDC150Q8NCX0 1101 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 DEPTORQ8TB45 409 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ZNF566Q969W8 418 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 VOPP1Q96AW1 172 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 CHST8Q9H2A9 424 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 CPNE5Q9HCH3 593 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 HEYLQ9NQ87 328 aaPredicted RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 ADARB2Q9NS39 739 aaKnown RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 DKK3Q9UBP4 350 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 CDC23Q9UJX2 597 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 MRPS17Q9Y2R5 130 aaKnown RBP2.93□□□□□ -1.94
PTPRC-208ENST00000427110 COX11Q9Y6N1 276 aa2.93□□□□□ -1.94
PTPRC-208ENST00000427110 LOC102723971A0A1B0GUV8 181 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 ABHD14A-ACY1A0A1B0GW23 586 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 E7ENX8 843 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 H7C4K7 107 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 CCP110O43303 1012 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 PIAS2O75928 621 aa2.92□□□□□ -1.94
PTPRC-208ENST00000427110 FGF18O76093 207 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms