RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 C8orf48Q96LL4 319 aa14.48□□□□□ -0.09
SNX3-204ENST00000426155 MYRFLQ96LU7 910 aa14.48□□□□□ -0.09
SNX3-204ENST00000426155 TRMT61BQ9BVS5 477 aaKnown RBP14.48□□□□□ -0.09
SNX3-204ENST00000426155 NUP62CLQ9H1M0 184 aa14.48□□□□□ -0.09
SNX3-204ENST00000426155 BRD9Q9H8M2 597 aa14.48□□□□□ -0.09
SNX3-204ENST00000426155 TRPC7Q9HCX4 862 aa14.48□□□□□ -0.09
SNX3-204ENST00000426155 CILPO75339 1184 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 AP1G2O75843 785 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 RFX1P22670 979 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 ADORA2BP29275 332 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 FMO5P49326 533 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 DPCR1Q3MIW9 517 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 SLC44A4Q53GD3 710 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 TPRG1Q6ZUI0 275 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 UNC93AQ86WB7 457 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 MFSD6LQ8IWD5 586 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 CMTM8Q8IZV2 173 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 CCDC150Q8NCX0 1101 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 TTC16Q8NEE8 873 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 ZMIZ2Q8NF64 920 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 DEPDC1BQ8WUY9 529 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 MRPS31Q92665 395 aaKnown RBP14.47□□□□□ -0.09
SNX3-204ENST00000426155 CYP2S1Q96SQ9 504 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 SMOQ99835 787 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 SRRTQ9BXP5 876 aaKnown RBP14.47□□□□□ -0.09
SNX3-204ENST00000426155 CYP3A43Q9HB55 503 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 METTL14Q9HCE5 456 aaKnown RBP14.47□□□□□ -0.09
SNX3-204ENST00000426155 UXTQ9UBK9 157 aaPredicted RBP14.47□□□□□ -0.09
SNX3-204ENST00000426155 COQ4Q9Y3A0 265 aa14.47□□□□□ -0.09
SNX3-204ENST00000426155 MTF2Q9Y483 593 aaPredicted RBP14.47□□□□□ -0.09
SNX3-204ENST00000426155 SHISA7A6NL88 538 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 ARNTLO00327 626 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 DPYSL4O14531 572 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 DCNP07585 359 aaKnown RBP14.46□□□□□ -0.09
SNX3-204ENST00000426155 AVPR1AP37288 418 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 FCHO2Q0JRZ9 810 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 FOXR2Q6PJQ5 311 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 TRIM59Q8IWR1 403 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 CRYBG2Q8N1P7 616 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 USP13Q92995 863 aaPredicted RBP14.46□□□□□ -0.09
SNX3-204ENST00000426155 JAKMIP2Q96AA8 810 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 SMARCD1Q96GM5 515 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 GBP4Q96PP9 640 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 TTLL2Q9BWV7 592 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 NT5C1AQ9BXI3 368 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 DMAP1Q9NPF5 467 aaPredicted RBP14.46□□□□□ -0.09
SNX3-204ENST00000426155 CISHQ9NSE2 258 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 RWDD2AQ9UIY3 292 aa14.46□□□□□ -0.09
SNX3-204ENST00000426155 ATP8B3O60423 1300 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 TNFRSF10BO14763 440 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 ZNF263O14978 683 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 SOX9P48436 509 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 CLCN5P51795 746 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 SLC5A3P53794 718 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 MAP3K7CLP57077 242 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 STARD6P59095 220 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 PFKPQ01813 784 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 TNK2Q07912 1038 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 TCF15Q12870 199 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 TAF10Q12962 218 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 WDR44Q5JSH3 913 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 GPRIN1Q7Z2K8 1008 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 MON1AQ86VX9 555 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 YAF2Q8IY57 180 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 ARL14EPQ8N8R7 260 aaPredicted RBP14.45□□□□□ -0.1
SNX3-204ENST00000426155 SCAMP5Q8TAC9 235 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 BPIFB1Q8TDL5 484 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 KAT5Q92993 513 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 MYO15AQ9UKN7 3530 aa14.45□□□□□ -0.1
SNX3-204ENST00000426155 DMDP11532 3685 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 ABL1P00519 1130 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 CKMP06732 381 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 GLULP15104 373 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 DDX6P26196 483 aaKnown RBP eCLIP14.44□□□□□ -0.1
SNX3-204ENST00000426155 WEE1P30291 646 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 RAD23BP54727 409 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 CUL2Q13617 745 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 UBXN2BQ14CS0 331 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 PPP1R26Q5T8A7 1209 aaPredicted RBP14.44□□□□□ -0.1
SNX3-204ENST00000426155 TRIM68Q6AZZ1 485 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 PHLDB3Q6NSJ2 640 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 CLEC20AQ6ZU45 233 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 CCDC105Q8IYK2 499 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 NUP93Q8N1F7 819 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 CELF5Q8N6W0 485 aaKnown RBP14.44□□□□□ -0.1
SNX3-204ENST00000426155 SLC4A11Q8NBS3 891 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 PJA1Q8NG27 643 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 LMO3Q8TAP4 145 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 DNASE1L2Q92874 299 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 IRF7Q92985 503 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 CYFIP2Q96F07 1278 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 CNOT6LQ96LI5 555 aaKnown RBP14.44□□□□□ -0.1
SNX3-204ENST00000426155 CEP295NLQ96MC4 621 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 DDX23Q9BUQ8 820 aaKnown RBP14.44□□□□□ -0.1
SNX3-204ENST00000426155 TDP1Q9NUW8 608 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 GTSE1Q9NYZ3 720 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 TRPM5Q9NZQ8 1165 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 GCNT4Q9P109 453 aa14.44□□□□□ -0.1
SNX3-204ENST00000426155 PIAS3Q9Y6X2 628 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms