RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RFFLQ8WZ73 363 aa16.55■□□□□ 0.24
SHOX2-202ENST00000425436 PGLYRP2Q96PD5 576 aa16.55■□□□□ 0.24
SHOX2-202ENST00000425436 PACSIN1Q9BY11 444 aa16.55■□□□□ 0.24
SHOX2-202ENST00000425436 BCO2Q9BYV7 579 aa16.55■□□□□ 0.24
SHOX2-202ENST00000425436 ISCUQ9H1K1 167 aa16.55■□□□□ 0.24
SHOX2-202ENST00000425436 STXBP5LQ9Y2K9 1186 aa16.55■□□□□ 0.24
SHOX2-202ENST00000425436 HCFC2Q9Y5Z7 792 aa16.55■□□□□ 0.24
SHOX2-202ENST00000425436 WDR27A2RRH5 827 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 OR6C75A6NL08 312 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 RTN2O75298 545 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 PNMA6AP0CW24 399 aaPredicted RBP16.54■□□□□ 0.24
SHOX2-202ENST00000425436 CPB1P15086 417 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 USP8P40818 1118 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 PDE6CP51160 858 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 PSMC1P62191 440 aaKnown RBP16.54■□□□□ 0.24
SHOX2-202ENST00000425436 CCDC142Q17RM4 750 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 CFAP221Q4G0U5 840 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 CCDC181Q5TID7 509 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 PPP1R2P3Q6NXS1 205 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 LILRA6Q6PI73 481 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 RNF19BQ6ZMZ0 732 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 MSANTD4Q8NCY6 345 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 KAT5Q92993 513 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 PBKQ96KB5 322 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 KREMEN1Q96MU8 473 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 ACBD6Q9BR61 282 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 TLR10Q9BXR5 811 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 DPEP3Q9H4B8 488 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 CLDND1Q9NY35 253 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 HMGXB4Q9UGU5 601 aa16.54■□□□□ 0.24
SHOX2-202ENST00000425436 NCANO14594 1321 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 MTCL1Q9Y4B5 1905 aaKnown RBP16.53■□□□□ 0.24
SHOX2-202ENST00000425436 GRID2IPA4D2P6 1211 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 A8MXQ7 604 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 GLP2RO95838 553 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 GLUD1P00367 558 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 NDST1P52848 882 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 HADHBP55084 474 aaKnown RBP16.53■□□□□ 0.24
SHOX2-202ENST00000425436 ADAM15Q13444 863 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 CUL2Q13617 745 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 KCNC3Q14003 757 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 RPS6KA1Q15418 735 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 SLC39A12Q504Y0 691 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 FBXO38Q6PIJ6 1188 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 TMCO3Q6UWJ1 677 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 CREG2Q8IUH2 290 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 MAFAQ8NHW3 353 aaPredicted RBP16.53■□□□□ 0.24
SHOX2-202ENST00000425436 TPCN2Q8NHX9 752 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 ZNF461Q8TAF7 563 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 RUBCNQ92622 972 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 CDCA3Q99618 268 aaPredicted RBP16.53■□□□□ 0.24
SHOX2-202ENST00000425436 SELENOOQ9BVL4 669 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 PARD6BQ9BYG5 372 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 ZCWPW1Q9H0M4 648 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 SEPT11Q9NVA2 429 aaKnown RBP16.53■□□□□ 0.24
SHOX2-202ENST00000425436 TMLHEQ9NVH6 421 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 GTF3C4Q9UKN8 822 aa16.53■□□□□ 0.24
SHOX2-202ENST00000425436 SPTBN5Q9NRC6 3674 aaKnown RBP16.52■□□□□ 0.24
SHOX2-202ENST00000425436 TARSL2A2RTX5 802 aaKnown RBP16.52■□□□□ 0.24
SHOX2-202ENST00000425436 MYBPHLA2RUH7 354 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 CCDC151A5D8V7 595 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 ERLIN1O75477 346 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 ABLIM3O94929 683 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 FAM163BP0C2L3 166 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 GPC5P78333 572 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 CDR2Q01850 454 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 DLX2Q07687 328 aaPredicted RBP16.52■□□□□ 0.24
SHOX2-202ENST00000425436 ADCY1Q08828 1119 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 ZNF394Q53GI3 561 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 SLFN11Q7Z7L1 901 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 EPS8L1Q8TE68 723 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 FAXDC2Q96IV6 333 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 SYT15Q9BQS2 421 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 OXCT2Q9BYC2 517 aaPredicted RBP16.52■□□□□ 0.24
SHOX2-202ENST00000425436 CISHQ9NSE2 258 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 RAB21Q9UL25 225 aa16.52■□□□□ 0.24
SHOX2-202ENST00000425436 BARX2Q9UMQ3 279 aaPredicted RBP16.52■□□□□ 0.24
SHOX2-202ENST00000425436 CYP26A1O43174 497 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 SRGAP2O75044 1071 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 SEC24AO95486 1093 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 VNN2O95498 520 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 CYP11B1P15538 503 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 PCSK1P29120 753 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 LTBRP36941 435 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 TSPY1Q01534 308 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 GPR17Q13304 367 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 CLUL1Q15846 466 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 CTC1Q2NKJ3 1217 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 INTS6LQ5JSJ4 861 aaKnown RBP16.51■□□□□ 0.23
SHOX2-202ENST00000425436 ACOT1Q86TX2 421 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 C12orf76Q8N812 135 aaPredicted RBP16.51■□□□□ 0.23
SHOX2-202ENST00000425436 LRRC57Q8N9N7 239 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 ATAD1Q8NBU5 361 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 KREMEN2Q8NCW0 462 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 OLIG1Q8TAK6 271 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
SHOX2-202ENST00000425436 HNRNPLLQ8WVV9 542 aaKnown RBP16.51■□□□□ 0.23
SHOX2-202ENST00000425436 TWNKQ96RR1 684 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms