RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 AOC3Q16853 763 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 KCNT1Q5JUK3 1230 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 C6orf163Q5TEZ5 329 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 SATL1Q86VE3 508 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 RASSF3Q86WH2 238 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 UNC45BQ8IWX7 931 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 OR6Y1Q8NGX8 325 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 C20orf27Q9GZN8 174 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 SLC4A7Q9Y6M7 1214 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 KBTBD13C9JR72 458 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 ZC3H11AO75152 810 aaKnown RBP eCLIP17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 AVILO75366 819 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 VNN1O95497 513 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 INHBCP55103 352 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 BASP1P80723 227 aaKnown RBP17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 TMPRSS15P98073 1019 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 MSLNQ13421 630 aaPredicted RBP17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 ACAD11Q709F0 780 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 PCGF5Q86SE9 256 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 PDSS2Q86YH6 399 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 ST13P4Q8IZP2 240 aaPredicted RBP17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 PDIK1LQ8N165 341 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 NAT14Q8WUY8 206 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 DTNBP1Q96EV8 351 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 VCPIP1Q96JH7 1222 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 EBF4Q9BQW3 602 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 CCDC106Q9BWC9 280 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 DBNDD1Q9H9R9 158 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 IKBKGQ9Y6K9 419 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 COMMD3-BMI1R4GMX3 469 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 COPEO14579 308 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 INHBAP08476 426 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 MMP8P22894 467 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 SLC25A3Q00325 362 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 CUL2Q13617 745 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 SLC44A1Q8WWI5 657 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 AGO4Q9HCK5 861 aaKnown RBP17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 PREBQ9HCU5 417 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 PHF24Q9UPV7 400 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 MRPL11Q9Y3B7 192 aaKnown RBP17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 A0A088AWK7 358 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 C3orf70A6NLC5 250 aaPredicted RBP17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 ZNF862O60290 1169 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 CST8O60676 142 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 HOXA10P31260 410 aaPredicted RBP17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 STIP1P31948 543 aaKnown RBP17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 AQP4P55087 323 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 YWHAGP61981 247 aaKnown RBP eCLIP17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 ZNF200P98182 395 aaPredicted RBP17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 DLG1Q12959 904 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 DCUN1D2Q6PH85 259 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 USP37Q86T82 979 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 LDHDQ86WU2 507 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 FAM71DQ8N9W8 422 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 USP6NLQ92738 828 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 SMYD3Q9H7B4 428 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 ATXN10Q9UBB4 475 aa17.4■□□□□ 0.38
NPC1L1-203ENST00000423141 TRIM49D1C9J1S8 452 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 I3L4J1 428 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 STK10O94804 968 aaKnown RBP17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 IL1BP01584 269 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 ACOT2P49753 483 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 CHI3L2Q15782 390 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 ZACNQ401N2 412 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 TMCO4Q5TGY1 634 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 ISLR2Q6UXK2 745 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 TRIM72Q6ZMU5 477 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 FAM172AQ8WUF8 416 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 RSAD2Q8WXG1 361 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 NMD3Q96D46 503 aaKnown RBP17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 IDI2Q9BXS1 227 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 SLC13A1Q9BZW2 595 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 IQCGQ9H095 443 aaKnown RBP17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 S100A14Q9HCY8 104 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 ADAMTS6Q9UKP5 1117 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 AGTPBP1Q9UPW5 1226 aa17.39■□□□□ 0.38
NPC1L1-203ENST00000423141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 KLF11O14901 512 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 CD48P09326 243 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 PABPC4LP0CB38 370 aaKnown RBP17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 CPOXP36551 454 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 MRPS5P82675 430 aaKnown RBP17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 MAP3K10Q02779 954 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 HNRNPDQ14103 355 aaKnown RBP17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 TKFCQ3LXA3 575 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 RALGPS1Q5JS13 557 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 DHDDSQ86SQ9 333 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 SPATA24Q86W54 205 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 AGBL1Q96MI9 1066 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 GPAMQ9HCL2 828 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 CLIC5Q9NZA1 410 aa17.39■□□□□ 0.37
NPC1L1-203ENST00000423141 ARHGAP42A6NI28 874 aa17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 G3V3G9 751 aa17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 C4BPAP04003 597 aaKnown RBP17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 C6orf222P0C671 652 aaPredicted RBP17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 PEX2P28328 305 aa17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 DNAL1Q4LDG9 190 aa17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 DCAF8Q5TAQ9 597 aa17.38■□□□□ 0.37
NPC1L1-203ENST00000423141 CYP4A22Q5TCH4 519 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms