RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 NUP93Q8N1F7 819 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 CSGALNACT1Q8TDX6 532 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 DEPDC1BQ8WUY9 529 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 FBXO32Q969P5 355 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 ASIC4Q96FT7 647 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 TMEM176AQ96HP8 235 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 SHDQ96IW2 340 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 SLC46A2Q9BY10 475 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 NACA2Q9H009 215 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 INTS2Q9H0H0 1204 aaKnown RBP11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 THAP9Q9H5L6 903 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 ARHGEF3Q9NR81 526 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 ANO10Q9NW15 660 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 THG1LQ9NWX6 298 aaKnown RBP11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 GCNT4Q9P109 453 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 WNT16Q9UBV4 365 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 ZMYM5Q9UJ78 669 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 COQ4Q9Y3A0 265 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 NOTCH4Q99466 2003 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 TPM2P07951 284 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 USP17L7P0C7H9 530 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 KRT5P13647 590 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 COL9A1P20849 921 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 PTMSP20962 102 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 FCARP24071 287 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 PDE6CP51160 858 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 SLC5A3P53794 718 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 MARSP56192 900 aaKnown RBP11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 TAF10Q12962 218 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 STX1AQ16623 288 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 CAVIN1Q6NZI2 390 aaKnown RBP11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 POTEHQ6S545 545 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 TMEM270Q6UE05 265 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 MON1AQ86VX9 555 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 CELF5Q8N6W0 485 aaKnown RBP11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 EHBP1Q8NDI1 1231 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 IRF7Q92985 503 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 MYRFLQ96LU7 910 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 CEP295NLQ96MC4 621 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 HNRNPABQ99729 332 aaKnown RBP11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 SLC2A4RGQ9NR83 387 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 HESX1Q9UBX0 185 aa11.71□□□□□ -0.53
TM9SF4-203ENST00000417389 TECTAO75443 2155 aa11.71□□□□□ -0.54
TM9SF4-203ENST00000417389 PRAMEF12O95522 483 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 HDCP19113 662 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 USP8P40818 1118 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 KPNA1P52294 538 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 RAD23BP54727 409 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 MCCD1P59942 119 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 GOLGA7BQ2TAP0 167 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 SLC44A4Q53GD3 710 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 SGO2Q562F6 1265 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 PPP1R26Q5T8A7 1209 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 GBP6Q6ZN66 633 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 TPRG1Q6ZUI0 275 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 PAQR9Q6ZVX9 377 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 BMP8AQ7Z5Y6 402 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 TMEM150AQ86TG1 271 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 MFSD6LQ8IWD5 586 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 ARL14EPQ8N8R7 260 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 SLC4A11Q8NBS3 891 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 PDZD8Q8NEN9 1154 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 SCAMP5Q8TAC9 235 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 TTC8Q8TAM2 541 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 BPIFB1Q8TDL5 484 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 WHAMMQ8TF30 809 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 CYP2S1Q96SQ9 504 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 SMOQ99835 787 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 TBC1D17Q9HA65 648 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 TRPV4Q9HBA0 871 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 UBE2TQ9NPD8 197 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 HEBP1Q9NRV9 189 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 TDP1Q9NUW8 608 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 TMEM30AQ9NV96 361 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 CHORDC1Q9UHD1 332 aaPredicted RBP11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 NFE2L3Q9Y4A8 694 aa11.7□□□□□ -0.54
TM9SF4-203ENST00000417389 KRBA1A5PL33 1030 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 C2orf78A6NCI8 922 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 KCNJ18B7U540 433 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 PMM2O15305 246 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 TADA3O75528 432 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 BEST1O76090 585 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 NPR3P17342 541 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 ACO1P21399 889 aaKnown RBP11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 PPP3CCP48454 512 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 KCNJ12Q14500 433 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 UBXN2BQ14CS0 331 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 MLF2Q15773 248 aaPredicted RBP11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 ARHGAP44Q17R89 818 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 EXOC3L4Q17RC7 722 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 ARHGAP29Q52LW3 1261 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 CT47A1Q5JQC4 288 aaPredicted RBP11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 ASTLQ6HA08 431 aaPredicted RBP11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 CLEC20AQ6ZU45 233 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 ARHGEF19Q8IW93 802 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 ANKRD20A12PQ8NF67 263 aa11.69□□□□□ -0.54
TM9SF4-203ENST00000417389 KAT5Q92993 513 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms