RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CYP2S1Q96SQ9 504 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 MED10Q9BTT4 135 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 TTLL2Q9BWV7 592 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 C8orf33Q9H7E9 229 aaPredicted RBP16.62■□□□□ 0.25
ITGB1-204ENST00000417122 TMEM30AQ9NV96 361 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 GTSE1Q9NYZ3 720 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 MAN1B1Q9UKM7 699 aa16.62■□□□□ 0.25
ITGB1-204ENST00000417122 C2orf78A6NCI8 922 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 PROB1E7EW31 1015 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 RPS9P46781 194 aaKnown RBP16.61■□□□□ 0.25
ITGB1-204ENST00000417122 SOX9P48436 509 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 NDST1P52848 882 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 PMS1P54277 932 aaKnown RBP16.61■□□□□ 0.25
ITGB1-204ENST00000417122 FKBP3Q00688 224 aaKnown RBP16.61■□□□□ 0.25
ITGB1-204ENST00000417122 LRRC63Q05C16 580 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 TNK2Q07912 1038 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 ORC1Q13415 861 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 STIM1Q13586 685 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 FAM35AQ86V20 835 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 UNC93AQ86WB7 457 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 ZNF687Q8N1G0 1237 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 CRYBG2Q8N1P7 616 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 ARL14EPQ8N8R7 260 aaPredicted RBP16.61■□□□□ 0.25
ITGB1-204ENST00000417122 TTC8Q8TAM2 541 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 SLC22A12Q96S37 553 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 APOBEC3GQ9HC16 384 aaKnown RBP16.61■□□□□ 0.25
ITGB1-204ENST00000417122 GKN1Q9NS71 199 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 SPATA6Q9NWH7 488 aaPredicted RBP16.61■□□□□ 0.25
ITGB1-204ENST00000417122 TRPM5Q9NZQ8 1165 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 GCNT4Q9P109 453 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 HMGXB4Q9UGU5 601 aa16.61■□□□□ 0.25
ITGB1-204ENST00000417122 SPECC1L-ADORA2AF8WAN1 911 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
ITGB1-204ENST00000417122 LAMTOR5O43504 91 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 STX10O60499 249 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 CKMP06732 381 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 PPP3CCP48454 512 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 MXI1P50539 228 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 PDE6CP51160 858 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 PAQR9Q6ZVX9 377 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 RALGPS2Q86X27 583 aaPredicted RBP16.6■□□□□ 0.25
ITGB1-204ENST00000417122 ZC3H3Q8IXZ2 948 aaKnown RBP16.6■□□□□ 0.25
ITGB1-204ENST00000417122 FUKQ8N0W3 1084 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 NUP93Q8N1F7 819 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 SMARCD1Q96GM5 515 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 KCNK16Q96T55 309 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 FAM83CQ9BQN1 747 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 CYP3A43Q9HB55 503 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
ITGB1-204ENST00000417122 HELZP42694 1942 aaKnown RBP16.6■□□□□ 0.25
ITGB1-204ENST00000417122 MYH10P35580 1976 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 PSMA7O14818 248 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 SP9P0CG40 484 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 CCDC130P13994 396 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 PFKLP17858 780 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 HDCP19113 662 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 TRIM21P19474 475 aaKnown RBP16.59■□□□□ 0.25
ITGB1-204ENST00000417122 CTHP32929 405 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 PPP1R2P41236 205 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 INCA1Q0VD86 236 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 IFRD2Q12894 506 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-204ENST00000417122 TAF10Q12962 218 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 ITPRIPL2Q3MIP1 535 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 DCAF17Q5H9S7 520 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-204ENST00000417122 TCERG1LQ5VWI1 586 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 CC2D1AQ6P1N0 951 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-204ENST00000417122 FRMD5Q7Z6J6 570 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 MAML2Q8IZL2 1156 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-204ENST00000417122 FBXL13Q8NEE6 735 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 DHTKD1Q96HY7 919 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-204ENST00000417122 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 NIF3L1Q9GZT8 377 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 LMAN1LQ9HAT1 526 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 DMAP1Q9NPF5 467 aaPredicted RBP16.59■□□□□ 0.25
ITGB1-204ENST00000417122 KRT82Q9NSB4 513 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 RAB20Q9NX57 234 aa16.59■□□□□ 0.25
ITGB1-204ENST00000417122 ZNF840PA6NDX5 716 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 AP1G2O75843 785 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 RTN3O95197 1032 aaPredicted RBP16.58■□□□□ 0.24
ITGB1-204ENST00000417122 ABL1P00519 1130 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 CHRNB1P11230 501 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
ITGB1-204ENST00000417122 YWHAQP27348 245 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 USP4Q13107 963 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 RUNX3Q13761 415 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 MTF1Q14872 753 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 ZNF77Q15935 545 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 TRIM68Q6AZZ1 485 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 TXNDC11Q6PKC3 985 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 C12orf29Q8N999 325 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 SLC2A14Q8TDB8 520 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 SEMA4DQ92854 862 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 TWNKQ96RR1 684 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 NT5C1AQ9BXI3 368 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 EBF3Q9H4W6 596 aa16.58■□□□□ 0.24
ITGB1-204ENST00000417122 HPS4Q9NQG7 708 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms