RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 LVRNQ6Q4G3 990 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 SERPINA13PQ6UXR4 307 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 C18orf65Q6ZTR6 163 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 MAVSQ7Z434 540 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 C14orf80Q86SX3 495 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 PIM3Q86V86 326 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 PDSS2Q86YH6 399 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 JADE3Q92613 823 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 HSPBAP1Q96EW2 488 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 TEKT5Q96M29 485 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 AIFM3Q96NN9 605 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 CNPPD1Q9BV87 410 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 FSD1LQ9BXM9 530 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 BRD9Q9H8M2 597 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 ETAA1Q9NY74 926 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 SH2B3Q9UQQ2 575 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 EME2A4GXA9 379 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 PRPF3O43395 683 aaKnown RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 CAND2O75155 1236 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 ZRANB2O95218 330 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 CHEK2O96017 543 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 CHRM5P08912 532 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 PSG1P11464 419 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 AKAP5P24588 427 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 GNALP38405 381 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 GCLCP48506 637 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 ZNF135P52742 658 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 ADKP55263 362 aaKnown RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 GPSM2P81274 684 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 HABP2Q14520 560 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 ACAP2Q15057 778 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 GFOD2Q3B7J2 385 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 MINDY4Q4G0A6 757 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 TPH2Q8IWU9 490 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 ADHFE1Q8IWW8 467 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 CCAR1Q8IX12 1150 aaKnown RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 FAM109AQ8N4B1 249 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 HDAC10Q969S8 669 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 SLC52A1Q9NWF4 448 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 PI4KBQ9UBF8 816 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 GABBR1Q9UBS5 961 aa3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 NOB1Q9ULX3 412 aaKnown RBP3.08□□□□□ -1.92
HMGB3P2-201ENST00000411913 EIF5BO60841 1220 aaKnown RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 NDUFS2O75306 463 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 IL33O95760 270 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 FESP07332 822 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 GJB1P08034 283 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 GNAI3P08754 354 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 HOXD9P28356 352 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 DEKP35659 375 aaKnown RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 WASP42768 502 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 GNAI1P63096 354 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 ZNF91Q05481 1191 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 TBC1D25Q3MII6 688 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 CCDC93Q567U6 631 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 MEX3CQ5U5Q3 659 aaKnown RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 ICE2Q659A1 982 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 ATG9BQ674R7 924 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 SFRP4Q6FHJ7 346 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 TMEM108Q6UXF1 575 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 ZNF813Q6ZN06 617 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 EPM2AIP1Q7L775 607 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 DGKHQ86XP1 1220 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 CCDC146Q8IYE0 955 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 DCP1BQ8IZD4 617 aaKnown RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 ABHD11Q8NFV4 315 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 RP9Q8TA86 221 aaKnown RBP3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 CLPTM1LQ96KA5 538 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 SIK2Q9H0K1 926 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 SLCO5A1Q9H2Y9 848 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 MAN1C1Q9NR34 630 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 CFAP97Q9P2B7 532 aa3.07□□□□□ -1.92
HMGB3P2-201ENST00000411913 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 ERC2O15083 957 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 SGTAO43765 313 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 KIF20AO95235 890 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 PDE8BO95263 885 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 MAP4K4O95819 1239 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 KRT18P05783 430 aaKnown RBP3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 CYP19A1P11511 503 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 HSPA6P17066 643 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 C5AR1P21730 350 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 ME1P48163 572 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 TLE1Q04724 770 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 ZNF585BQ52M93 769 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 DAB2IPQ5VWQ8 1189 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 KIRREL2Q6UWL6 708 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 MIER2Q8N344 545 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 TERB1Q8NA31 727 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 XAGE5Q8WWM1 108 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 EFHD1Q9BUP0 239 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 TINAGL1Q9GZM7 467 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 NMRK2Q9NPI5 230 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 SLAMF7Q9NQ25 335 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 PRDM11Q9NQV5 511 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 GNL3LQ9NVN8 582 aaKnown RBP3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 MRPS18AQ9NVS2 196 aaKnown RBP3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 OBP2AQ9NY56 170 aa3.06□□□□□ -1.92
HMGB3P2-201ENST00000411913 CALCOCO1Q9P1Z2 691 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms