RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 TDP1Q9NUW8 608 aa6.92□□□□□ -1.3
LINC00396-201ENST00000411690 SLC38A7Q9NVC3 462 aa6.92□□□□□ -1.3
LINC00396-201ENST00000411690 DUS2Q9NX74 493 aaKnown RBP6.92□□□□□ -1.3
LINC00396-201ENST00000411690 SUSD2Q9UGT4 822 aa6.92□□□□□ -1.3
LINC00396-201ENST00000411690 IL17BQ9UHF5 180 aa6.92□□□□□ -1.3
LINC00396-201ENST00000411690 AK5Q9Y6K8 562 aa6.92□□□□□ -1.3
LINC00396-201ENST00000411690 MUC22E2RYF6 1773 aaPredicted RBP6.92□□□□□ -1.3
LINC00396-201ENST00000411690 CYP3A7-CYP3A51PA0A087WV96 503 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 ZBTB43O43298 467 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 SOAT2O75908 522 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 TDP2O95551 362 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 GNSP15586 552 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 CYP3A7P24462 503 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 MCM4P33991 863 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 YWHAHQ04917 246 aaPredicted RBP6.91□□□□□ -1.3
LINC00396-201ENST00000411690 GRIK2Q13002 908 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 GPR17Q13304 367 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 LY6DQ14210 128 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 CTTNQ14247 550 aaKnown RBP6.91□□□□□ -1.3
LINC00396-201ENST00000411690 SMAD1Q15797 465 aaKnown RBP6.91□□□□□ -1.3
LINC00396-201ENST00000411690 FAM187BQ17R55 369 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 DCAF4L1Q3SXM0 396 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 CCDC157Q569K6 752 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 EOGTQ5NDL2 527 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 CENPPQ6IPU0 288 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 SLC41A1Q8IVJ1 513 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 ZBTB8OSQ8IWT0 167 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 ALLCQ8N6M5 410 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 TRIML1Q8N9V2 468 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 TXNDC5Q8NBS9 432 aaKnown RBP6.91□□□□□ -1.3
LINC00396-201ENST00000411690 ATAD1Q8NBU5 361 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 BAHD1Q8TBE0 780 aaPredicted RBP6.91□□□□□ -1.3
LINC00396-201ENST00000411690 OSCP1Q8WVF1 389 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 ATP2A3Q93084 1043 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 POLR3FQ9H1D9 316 aaPredicted RBP6.91□□□□□ -1.3
LINC00396-201ENST00000411690 ZSWIM4Q9H7M6 989 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 RGL1Q9NZL6 768 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 USP20Q9Y2K6 914 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 ARID2Q68CP9 1835 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 PTPRDP23468 1912 aa6.91□□□□□ -1.3
LINC00396-201ENST00000411690 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 MYO16Q9Y6X6 1858 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TCRBV21S2A2A0A5A6 115 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 MTMR11A4FU01 709 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 GOLGA8BA8MQT2 603 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 SGK1O00141 431 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 FLRT2O43155 660 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TRAK2O60296 914 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 OAZ2O95190 189 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 KLF8O95600 359 aaPredicted RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 ZNF883P0CG24 379 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 JUPP14923 745 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 LIG1P18858 919 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 DDX6P26196 483 aaKnown RBP eCLIP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 CDC27P30260 824 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 ADSSP30520 456 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 RPL9P32969 192 aaKnown RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 IFNAR2P48551 515 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 YARSP54577 528 aaKnown RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TLE3Q04726 772 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 MTF1Q14872 753 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 VEPH1Q14D04 833 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 EPHA7Q15375 998 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 SYCP2LQ5T4T6 812 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 EEF1DP3Q658K8 133 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 B4GALNT3Q6L9W6 998 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 USP37Q86T82 979 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TMPRSS12Q86WS5 348 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TPH2Q8IWU9 490 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 IL17RCQ8NAC3 791 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TTC16Q8NEE8 873 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 CCDC148Q8NFR7 591 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 RIN3Q8TB24 985 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 SPATA18Q8TC71 538 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 DYDC2Q96IM9 177 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 HSPA12BQ96MM6 686 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 C22orf23Q9BZE7 217 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 GAREM1Q9H706 876 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TOPORSQ9NS56 1045 aaPredicted RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TM7SF3Q9NS93 570 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 NDFIP2Q9NV92 336 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 NOP53Q9NZM5 478 aaKnown RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 DDX25Q9UHL0 483 aaKnown RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 VAV3Q9UKW4 847 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 BRPF3Q9ULD4 1205 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 ATXN7L1Q9ULK2 861 aaPredicted RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 TIMM13Q9Y5L4 95 aaPredicted RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 RBM8AQ9Y5S9 174 aaKnown RBP6.9□□□□□ -1.3
LINC00396-201ENST00000411690 WNT6Q9Y6F9 365 aa6.9□□□□□ -1.3
LINC00396-201ENST00000411690 SPTA1P02549 2419 aa6.9□□□□□ -1.31
LINC00396-201ENST00000411690 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.31
LINC00396-201ENST00000411690 CFAP46Q8IYW2 2715 aa6.9□□□□□ -1.31
LINC00396-201ENST00000411690 COL5A1P20908 1838 aaPredicted RBP6.9□□□□□ -1.31
LINC00396-201ENST00000411690 A0A1B0GTH6 734 aa6.89□□□□□ -1.31
LINC00396-201ENST00000411690 OR6C75A6NL08 312 aa6.89□□□□□ -1.31
LINC00396-201ENST00000411690 ENO4A6NNW6 628 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms