RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 USP45Q70EL2 814 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 PNMA8AQ86V59 439 aaPredicted RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 CAND1Q86VP6 1230 aaKnown RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 ABRAQ8N0Z2 381 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 PELI3Q8N2H9 469 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 ABHD11Q8NFV4 315 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 RP9Q8TA86 221 aaKnown RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 PNISRQ8TF01 805 aaKnown RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 WIPF2Q8TF74 440 aaPredicted RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 NSMCE1Q8WV22 266 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 SOCS4Q8WXH5 440 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 MAP4K1Q92918 833 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 SNX18Q96RF0 628 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 P2RX7Q99572 595 aaKnown RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 GTPBP4Q9BZE4 634 aaKnown RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 GBA2Q9HCG7 927 aaPredicted RBP1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 MAN1C1Q9NR34 630 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 XPR1Q9UBH6 696 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 CPA4Q9UI42 421 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 ZDHHC8Q9ULC8 765 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 GABRQQ9UN88 632 aa1.97□□□□□ -2.09
RNU2-55P-201ENST00000411146 H7C1Q1 480 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 TJP3O95049 919 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 FGAP02671 866 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 A1BGP04217 495 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 ATXN1LP0C7T5 689 aaKnown RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 PSG1P11464 419 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 TNFRSF1BP20333 461 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 CDK11BP21127 795 aaKnown RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 COPB1P53618 953 aaKnown RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 LOXL3P58215 753 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 YPEL5P62699 121 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 HTRA4P83105 476 aaPredicted RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 AMPD3Q01432 767 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 E2F2Q14209 437 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZNF268Q14587 947 aaPredicted RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 FAM187BQ17R55 369 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 UBAP2Q5T6F2 1119 aaKnown RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 SFRP4Q6FHJ7 346 aaPredicted RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 KIAA1161Q6NSJ0 714 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 LAYNQ6UX15 382 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZDHHC24Q6UX98 284 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZNF813Q6ZN06 617 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZNF804AQ7Z570 1209 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 KCTD20Q7Z5Y7 419 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 PRPF38AQ8NAV1 312 aaKnown RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZNF398Q8TD17 642 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 PPP2R3CQ969Q6 453 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 CTHRC1Q96CG8 243 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 MARK4Q96L34 752 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 MRGPRX1Q96LB2 322 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 SIGLEC11Q96RL6 698 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 SMAD5Q99717 465 aaKnown RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 MESP1Q9BRJ9 268 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 C17orf80Q9BSJ5 609 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 WDCPQ9H6R7 721 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 MLXIPLQ9NP71 852 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 GNL3LQ9NVN8 582 aaKnown RBP1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 ASAP1Q9ULH1 1129 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 PROCRQ9UNN8 238 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 SH2B3Q9UQQ2 575 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 POLHQ9Y253 713 aa1.96□□□□□ -2.1
RNU2-55P-201ENST00000411146 MYMKA6NI61 221 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 AGPSO00116 658 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 CES2O00748 559 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 SMAD6O43541 496 aaKnown RBP1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 TLR2O60603 784 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 CRYABP02511 175 aaKnown RBP1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 GNAI2P04899 355 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 FTH1P19P0C7X4 201 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 APEHP13798 732 aaKnown RBP1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 KCNA3P22001 575 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 PPIFP30405 207 aaKnown RBP1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 THBS4P35443 961 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 KCNJ5P48544 419 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 SLC11A2P49281 568 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 DGKEP52429 567 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 TPTEP56180 551 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 LMAN2Q12907 356 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 ERV3-1Q14264 604 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 ODF3L2Q3SX64 289 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 KHDC1LQ5JSQ8 128 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 C9orf47Q6ZRZ4 202 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 USP43Q70EL4 1123 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 NECAB2Q7Z6G3 386 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 IZUMO1Q8IYV9 350 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 SLC15A4Q8N697 577 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 ADAMTS18Q8TE60 1221 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 OSCP1Q8WVF1 389 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 RAPGEF4Q8WZA2 1011 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 SLC35A4Q96G79 324 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZBTB45Q96K62 511 aaPredicted RBP1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZBTB40Q9NUA8 1239 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 USP35Q9P2H5 1018 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 FEZ2Q9UHY8 353 aaPredicted RBP1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 MCM8Q9UJA3 840 aa1.95□□□□□ -2.1
RNU2-55P-201ENST00000411146 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms