RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 POU5F1BQ06416 359 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 AARS2Q5JTZ9 985 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 TMTC4Q5T4D3 741 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 RPAINQ86UA6 219 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 TMEM199Q8N511 208 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 HAS1Q92839 578 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 CINPQ9BW66 212 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 MLXIPLQ9NP71 852 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 DMAP1Q9NPF5 467 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 XPO7Q9UIA9 1087 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 H0Y626 953 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 NCF2P19878 526 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 RPL9P32969 192 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 NSUN2Q08J23 767 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 TBX2Q13207 712 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 PPTC7Q8NI37 304 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 DCLK3Q9C098 648 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 ARHGEF38Q9NXL2 777 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 LRRC10BA6NIK2 292 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 WTIPA6NIX2 430 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 PQBP1O60828 265 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 XYLBO75191 536 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 CKMP06732 381 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 MBL2P11226 248 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 COILP38432 576 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 PABPC1LQ4VXU2 614 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 SEZ6Q53EL9 994 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 PTPRN2Q92932 1015 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 SH3KBP1Q96B97 665 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 SGSM3Q96HU1 749 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 HSD17B14Q9BPX1 270 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 CELF4Q9BZC1 486 aaKnown RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 KRT82Q9NSB4 513 aa17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 PSMC3IPQ9P2W1 217 aaPredicted RBP17.47■□□□□ 0.39
PCDHA13-202ENST00000409494 YDJCA8MPS7 323 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 ADCY6O43306 1168 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 MAP4P27816 1152 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 C2CD2Q9Y426 696 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 CCDC22O60826 627 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 PHEXP78562 749 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 SNX19Q92543 992 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 MAML1Q92585 1016 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 HTATIP2Q9BUP3 242 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 ISCUQ9H1K1 167 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 PKP3Q9Y446 797 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 EXT2Q93063 718 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 TRIM51Q9BSJ1 452 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 LACRTQ9GZZ8 138 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 KLC4Q9NSK0 619 aa17.46■□□□□ 0.39
PCDHA13-202ENST00000409494 CFAP73A6NFT4 308 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 CYP2C18P33260 490 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 AVPR1AP37288 418 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 ZNF200P98182 395 aaPredicted RBP17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 ACBD5Q5T8D3 534 aaPredicted RBP17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 TEDDM1Q5T9Z0 273 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 UGT3A1Q6NUS8 523 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 GJB7Q6PEY0 223 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 TTC30AQ86WT1 665 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 ZNF606Q8WXB4 792 aa17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 CCDC124Q96CT7 223 aaKnown RBP17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 THOC1Q96FV9 657 aaKnown RBP17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 SARS2Q9NP81 518 aaKnown RBP17.46■□□□□ 0.38
PCDHA13-202ENST00000409494 ZNF263O14978 683 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 USP2O75604 605 aaPredicted RBP17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 AGBL2Q5U5Z8 902 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 SPRYD7Q5W111 196 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 PARP9Q8IXQ6 854 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 STK39Q9UEW8 545 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 DUSP10Q9Y6W6 482 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 CCR1P32246 355 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 CCNYL1Q8N7R7 359 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 ETNPPLQ8TBG4 499 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 TGS1Q96RS0 853 aaKnown RBP17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 GTSE1Q9NYZ3 720 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 DERAQ9Y315 318 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 SPECC1L-ADORA2AF8WAN1 911 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 GNRH1P01148 92 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 SMIM10L2AP0DMW4 78 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 SMIM10L2BP0DMW5 78 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 ICAM3P32942 547 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 RENBPP51606 427 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 LRRC14Q15048 493 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 TTLL9Q3SXZ7 439 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 FASTKD1Q53R41 847 aaKnown RBP17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 C12orf56Q8IXR9 622 aa17.45■□□□□ 0.38
PCDHA13-202ENST00000409494 PDAP1Q13442 181 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 KIF19Q2TAC6 998 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 MEI1Q5TIA1 1274 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 LRRN4CLQ8ND94 238 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 GPR63Q9BZJ6 419 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 ATRNL1Q5VV63 1379 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 SMIM35A0A1B0GVV1 85 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 LRRIQ3A6PVS8 624 aaPredicted RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 LACTBL1A8MY62 500 aa17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 RNASEH1O60930 286 aaKnown RBP17.44■□□□□ 0.38
PCDHA13-202ENST00000409494 APOA4P06727 396 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms