RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 TBC1D22BQ9NU19 505 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 ANGPTL2Q9UKU9 493 aa13.56□□□□□ -0.24
PTPRN-202ENST00000409251 BTNL10A8MVZ5 291 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 PEX1O43933 1283 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 TOM1L1O75674 476 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 STXBP2Q15833 593 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 CCDC110Q8TBZ0 833 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 GRK7Q8WTQ7 553 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 SLC10A4Q96EP9 437 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 CFAP36Q96G28 342 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 HSPBP1Q9NZL4 362 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 BSPRYQ5W0U4 402 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 C11orf63Q6NUN7 778 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 PAOXQ6QHF9 649 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 TRABD2AQ86V40 505 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 ARHGAP24Q8N264 748 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 GRIP2Q9C0E4 1043 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 SPATC1LQ9H0A9 340 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 POLR3FQ9H1D9 316 aaPredicted RBP13.55□□□□□ -0.24
PTPRN-202ENST00000409251 DNPEPQ9ULA0 475 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 PPM1HQ9ULR3 514 aa13.55□□□□□ -0.24
PTPRN-202ENST00000409251 PIK3R2O00459 728 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 ASMTLO95671 621 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 DESP17661 470 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 NCF2P19878 526 aaPredicted RBP13.54□□□□□ -0.24
PTPRN-202ENST00000409251 VAMP7P51809 220 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 DRG2P55039 364 aaKnown RBP13.54□□□□□ -0.24
PTPRN-202ENST00000409251 SLC5A9Q2M3M2 681 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 C10orf82Q8WW14 230 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 STARD13Q9Y3M8 1113 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 ZMYM2Q9UBW7 1377 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 I3L4J1 428 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 CFLARO15519 480 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 SORBS2O94875 1100 aaKnown RBP13.54□□□□□ -0.24
PTPRN-202ENST00000409251 KRT1P04264 644 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 TNNI1P19237 187 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 NSFP46459 744 aaKnown RBP13.54□□□□□ -0.24
PTPRN-202ENST00000409251 LBRQ14739 615 aaKnown RBP13.54□□□□□ -0.24
PTPRN-202ENST00000409251 HSDL1Q3SXM5 330 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 CCDC33Q8N5R6 958 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 INPP5DQ92835 1189 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 NLRP4Q96MN2 994 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 FIZ1Q96SL8 496 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 FAF1Q9UNN5 650 aaPredicted RBP13.54□□□□□ -0.24
PTPRN-202ENST00000409251 GAP43P17677 238 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 FUT4P22083 530 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 MAGEA10P43363 369 aaPredicted RBP13.54□□□□□ -0.24
PTPRN-202ENST00000409251 ARL4CP56559 192 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 WDR72Q3MJ13 1102 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 RAPH1Q70E73 1250 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 PPM1NQ8N819 430 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 CNBD2Q96M20 576 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 APOL6Q9BWW8 343 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 ZWILCHQ9H900 591 aa13.54□□□□□ -0.24
PTPRN-202ENST00000409251 FRMPD4Q14CM0 1322 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 RNASEH1O60930 286 aaKnown RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 AP2B1P63010 937 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 BMPR2Q13873 1038 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 LIN52Q52LA3 116 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 SCARA3Q6AZY7 606 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 DCUN1D2Q6PH85 259 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 STXBP4Q6ZWJ1 553 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 PDP2Q9P2J9 529 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 MAGED2Q9UNF1 606 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ANKRD33BA6NCL7 494 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ARIH2O95376 493 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ADRB2P07550 413 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 GSTA2P09210 222 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 NCOA4Q13772 614 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 PDK4Q16654 411 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 KCNT1Q5JUK3 1230 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ZBTB41Q5SVQ8 909 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 SPOPLQ6IQ16 392 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 SCUBE1Q8IWY4 988 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 RBM15BQ8NDT2 890 aaKnown RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 DCLK3Q9C098 648 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 IFT122Q9HBG6 1241 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 DMAP1Q9NPF5 467 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 KRT82Q9NSB4 513 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 WHRNQ9P202 907 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ZWINTO95229 277 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 CYP1A1P04798 512 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 INHBAP08476 426 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ANPEPP15144 967 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 TCN1P20061 433 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 KCTD2Q14681 263 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 SDCCAG8Q86SQ7 713 aaPredicted RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 EPS8L1Q8TE68 723 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 SENP7Q9BQF6 1050 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
PTPRN-202ENST00000409251 SPATA16Q9BXB7 569 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 PHACTR1Q9C0D0 580 aa13.53□□□□□ -0.24
PTPRN-202ENST00000409251 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms