RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SMG9Q9H0W8 520 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 FAM124BQ9H5Z6 455 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 ARHGEF3Q9NR81 526 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 TADA3O75528 432 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 MBD3O95983 291 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 RFX1P22670 979 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 GDI1P31150 447 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 IFRD2Q12894 506 aaPredicted RBP19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 SLC44A4Q53GD3 710 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 NUP93Q8N1F7 819 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 EHBP1Q8NDI1 1231 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 TMEM176AQ96HP8 235 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 NT5C1BQ96P26 610 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 SMOQ99835 787 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 TRPC7Q9HCX4 862 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 TRPM5Q9NZQ8 1165 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 HCN4Q9Y3Q4 1203 aa19.03■□□□□ 0.64
PDLIM2-206ENST00000409141 PTPRDP23468 1912 aa19.02■□□□□ 0.64
PDLIM2-206ENST00000409141 ZNF263O14978 683 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 RTN3O95197 1032 aaPredicted RBP19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 PRAMEF12O95522 483 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 NPR3P17342 541 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 TBXAS1P24557 533 aaPredicted RBP19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 YWHAQP27348 245 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 MAP3K7CLP57077 242 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 YWHAEP62258 255 aaKnown RBP19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 IER5LQ5T953 404 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 CELF5Q8N6W0 485 aaKnown RBP19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 IRF7Q92985 503 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 SHDQ96IW2 340 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 OBP2AQ9NY56 170 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 RAPGEFL1Q9UHV5 662 aa19.02■□□□□ 0.63
PDLIM2-206ENST00000409141 NCANO14594 1321 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 BEST1O76090 585 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 FAM200BP0CF97 657 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 AVPR2P30518 371 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 PPP3CCP48454 512 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 RAD23BP54727 409 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 TAF10Q12962 218 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 CT47A1Q5JQC4 288 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 ASTLQ6HA08 431 aaPredicted RBP19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 IRF2BP1Q8IU81 584 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 SLC4A11Q8NBS3 891 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 LMO3Q8TAP4 145 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 LRRC3BQ96PB8 259 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 SLITRK1Q96PX8 696 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 CYP2S1Q96SQ9 504 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 THAP9Q9H5L6 903 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 CSNK1G1Q9HCP0 422 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 TDP1Q9NUW8 608 aa19.01■□□□□ 0.63
PDLIM2-206ENST00000409141 TRAV19A0A0A6YYK7 116 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 ABL1P00519 1130 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 MTIF2P46199 727 aaKnown RBP19■□□□□ 0.63
PDLIM2-206ENST00000409141 CLCN5P51795 746 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 VCPP55072 806 aaKnown RBP19■□□□□ 0.63
PDLIM2-206ENST00000409141 MLF2Q15773 248 aaPredicted RBP19■□□□□ 0.63
PDLIM2-206ENST00000409141 PPP1R26Q5T8A7 1209 aaPredicted RBP19■□□□□ 0.63
PDLIM2-206ENST00000409141 RBM43Q6ZSC3 357 aaKnown RBP19■□□□□ 0.63
PDLIM2-206ENST00000409141 FAM114A1Q8IWE2 563 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 PPM1KQ8N3J5 372 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 ZMIZ2Q8NF64 920 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 SCAMP5Q8TAC9 235 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 BPIFB1Q8TDL5 484 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 DNASE1L2Q92874 299 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 USP13Q92995 863 aaPredicted RBP19■□□□□ 0.63
PDLIM2-206ENST00000409141 TBC1D17Q9HA65 648 aa19■□□□□ 0.63
PDLIM2-206ENST00000409141 C2orf78A6NCI8 922 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 ZNF840PA6NDX5 716 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 TNFRSF10BO14763 440 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 CHADO15335 359 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 USP17L7P0C7H9 530 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 HDCP19113 662 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 SLC5A3P53794 718 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 FCHO2Q0JRZ9 810 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 SASS6Q6UVJ0 657 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 CLEC20AQ6ZU45 233 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 ARL14EPQ8N8R7 260 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 FBXO32Q969P5 355 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 JAKMIP2Q96AA8 810 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 SLC22A12Q96S37 553 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 INTS2Q9H0H0 1204 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 HEBP1Q9NRV9 189 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 THG1LQ9NWX6 298 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 COMMD8Q9NX08 183 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 CCL26Q9Y258 94 aa18.99■□□□□ 0.63
PDLIM2-206ENST00000409141 CKMP06732 381 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 STARD6P59095 220 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 PRKCQQ04759 706 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 ARHGAP29Q52LW3 1261 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 CCDC183Q5T5S1 534 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 CWF19L1Q69YN2 538 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 PHLDB3Q6NSJ2 640 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 RRAGAQ7L523 313 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 PDZD8Q8NEN9 1154 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 DUSP16Q9BY84 665 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 KIF9Q9HAQ2 790 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 TRPV5Q9NQA5 729 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 IL37Q9NZH6 218 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 GCNT4Q9P109 453 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 CHORDC1Q9UHD1 332 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms