RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 ARCQ7LC44 396 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 OSTM1Q86WC4 334 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
CLIP4-203ENST00000401617 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
CLIP4-203ENST00000401617 SNF8Q96H20 258 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 ZFP42Q96MM3 310 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 SNX25Q9H3E2 840 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 GOLGA6AQ9NYA3 693 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 LRRD1A4D1F6 860 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 GABRDO14764 452 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 PAPSS1O43252 624 aaPredicted RBP12.88□□□□□ -0.35
CLIP4-203ENST00000401617 RNF8O76064 485 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 PDGFRBP09619 1106 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 CTSHP09668 335 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 NUDT17P0C025 328 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 PDGFRAP16234 1089 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 RGS7P49802 495 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 PMS2P54278 862 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 BCAT1P54687 386 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
CLIP4-203ENST00000401617 PTGISQ16647 500 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 ADGRF2Q8IZF7 708 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 UBLCP1Q8WVY7 318 aaPredicted RBP12.88□□□□□ -0.35
CLIP4-203ENST00000401617 CAPNS2Q96L46 248 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 OSBPL7Q9BZF2 842 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 DNAI2Q9GZS0 605 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 PABPC3Q9H361 631 aaKnown RBP12.88□□□□□ -0.35
CLIP4-203ENST00000401617 USP18Q9UMW8 372 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 ATP8A1Q9Y2Q0 1164 aa12.88□□□□□ -0.35
CLIP4-203ENST00000401617 CABYRO75952 493 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 RARGP13631 454 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 ARSEP51690 589 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 CAV1Q03135 178 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 PTK7Q13308 1070 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 DEFB115Q30KQ5 88 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 KAZNQ674X7 775 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 AGMOQ6ZNB7 445 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 BBS12Q6ZW61 710 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 FAM76AQ8TAV0 307 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 SLC35B2Q8TB61 432 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 ACSF2Q96CM8 615 aaPredicted RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 PEBP4Q96S96 227 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 GAD1Q99259 594 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 FRMD8P1Q9BZ68 369 aaPredicted RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 TSPYL2Q9H2G4 693 aaPredicted RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 AAASQ9NRG9 546 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 MIOSQ9NXC5 875 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 ASIC3Q9UHC3 531 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 DNPEPQ9ULA0 475 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 TDRD15B5MCY1 1934 aaKnown RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 THP07101 528 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 CCDC130P13994 396 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 VCPP55072 806 aaKnown RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 EIF3BP55884 814 aaKnown RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 CALCOCO2Q13137 446 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 SLMAPQ14BN4 828 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 CCDC14Q49A88 953 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 ODF2Q5BJF6 829 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 CCDC89Q8N998 374 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 TNIP3Q96KP6 325 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 HSFY1Q96LI6 401 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 HNRNPABQ99729 332 aaKnown RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 ZWILCHQ9H900 591 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 DDX20Q9UHI6 824 aaKnown RBP12.87□□□□□ -0.35
CLIP4-203ENST00000401617 PADI3Q9ULW8 664 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 SQORQ9Y6N5 450 aa12.87□□□□□ -0.35
CLIP4-203ENST00000401617 HMGB1P1B2RPK0 211 aaPredicted RBP12.86□□□□□ -0.35
CLIP4-203ENST00000401617 PIK3R2O00459 728 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 CYB561D2O14569 222 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 MGEA5O60502 916 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 TOMM70O94826 608 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 ITGAVP06756 1048 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 HOXD10P28358 340 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 THPOP40225 353 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 MLH1P40692 756 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 ACADSBP45954 432 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
CLIP4-203ENST00000401617 LPIN1Q14693 890 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 TAF5Q15542 800 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 SMTNL2Q2TAL5 461 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 KCNT1Q5JUK3 1230 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 SLC26A9Q7LBE3 791 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 ALLCQ8N6M5 410 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 B3GALNT2Q8NCR0 500 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 OR2W6PQ8NHA6 318 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 ATP6V1G3Q96LB4 118 aa12.86□□□□□ -0.35
CLIP4-203ENST00000401617 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms