RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CACUL1Q86Y37 369 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 C4orf33Q8N1A6 199 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 A0A087WZ62 844 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 A0A1W2PQC6 194 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 EIF3DO15371 548 aaKnown RBP eCLIP14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 NDUFB5O43674 189 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 UCHL3P15374 230 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 MAPRE2Q15555 327 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 MPZL3Q6UWV2 235 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 CCDC33Q8N5R6 958 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 FDXACB1Q9BRP7 624 aaPredicted RBP14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 NPHS2Q9NP85 383 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 IL17RBQ9NRM6 502 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 POMCP01189 267 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 PIGHQ14442 188 aaPredicted RBP14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 POLD3Q15054 466 aaPredicted RBP14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 GRAMD4Q6IC98 578 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 ADAM21Q9UKJ8 722 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 DSEQ9UL01 958 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 PSMD3O43242 534 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 HSPA9P38646 679 aaKnown RBP14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 PLD1Q13393 1074 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 NDE1Q9NXR1 346 aa14.81□□□□□ -0.04
PCDHA11-201ENST00000398640 CFAP99D6REC4 459 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 F5H5T6 163 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 CYB561D2O14569 222 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 CCDC22O60826 627 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 KRT4P19013 534 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 ZNF280AP59817 542 aaPredicted RBP14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 DPYDQ12882 1025 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 IFNEQ86WN2 208 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 SPATA4Q8NEY3 305 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 VMP1Q96GC9 406 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 C9orf72Q96LT7 481 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 GAS2L1Q99501 681 aaPredicted RBP14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 C7orf25Q9BPX7 421 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 TBX20Q9UMR3 447 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 LMO7Q8WWI1 1683 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 ACO1P21399 889 aaKnown RBP14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 ZBTB17Q13105 803 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 PHKG1Q16816 387 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 RBM15Q96T37 977 aaKnown RBP eCLIP14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 WDR35Q9P2L0 1181 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 NEU2Q9Y3R4 380 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 EFCAB14O75071 495 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 SLC9A1P19634 815 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 PLCL1Q15111 1095 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 SCUBE2Q9NQ36 999 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 ENO3P13929 434 aaPredicted RBP14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 GPD1P21695 349 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 CCL23P55773 120 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 ZNF280DQ6N043 979 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 RD3Q7Z3Z2 195 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 C7orf61Q8IZ16 206 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 TSPAN17Q96FV3 270 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 IL1RL2Q9HB29 575 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 PHF2O75151 1096 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 CSDE1O75534 798 aaKnown RBP14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 PCDH8O95206 1070 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 LGALS2P05162 132 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 OR2W6PQ8NHA6 318 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 SPATA18Q8TC71 538 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 WDCPQ9H6R7 721 aa14.8□□□□□ -0.04
PCDHA11-201ENST00000398640 FKBP9O95302 570 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 HSPA1AP0DMV8 641 aaKnown RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 HSPA1BP0DMV9 641 aaKnown RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 STK4Q13043 487 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 CYTH1Q15438 398 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 FKBP9P1Q75LS8 142 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 MTMR14Q8NCE2 650 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 FZD9O00144 591 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 FARP2O94887 1054 aaPredicted RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 LAMTOR4Q0VGL1 99 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 STAT4Q14765 748 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 SEC23AQ15436 765 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 NIPA1Q7RTP0 329 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 RGPD8O14715 1765 aaPredicted RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 M0QYT0 321 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 AOC2O75106 756 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 GNRH1P01148 92 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 MYL2P10916 166 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 TCN1P20061 433 aaPredicted RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 SP100P23497 879 aaPredicted RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 SLC18A3Q16572 532 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 ERAP2Q6P179 960 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 KLF6Q99612 283 aaPredicted RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 FAM32AQ9Y421 112 aaKnown RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 FAM208AQ9UK61 1670 aaKnown RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 AKAP12Q02952 1782 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 RAP1GAPP47736 663 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 EFEMP1Q12805 493 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 CELF3Q5SZQ8 465 aaKnown RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 ANO5Q75V66 913 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 ITIH5Q86UX2 942 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 PNKPQ96T60 521 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 BTKQ06187 659 aa14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 SFSWAPQ12872 951 aaKnown RBP14.79□□□□□ -0.04
PCDHA11-201ENST00000398640 LRRC36Q1X8D7 754 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms