RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 FUKQ8N0W3 1084 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 B3GALNT2Q8NCR0 500 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 GPATCH2LQ9NWQ4 482 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 DDX43Q9NXZ2 648 aaKnown RBP15.74■□□□□ 0.11
MKS1-202ENST00000393119 HPCAL4Q9UM19 191 aa15.74■□□□□ 0.11
MKS1-202ENST00000393119 XPOTO43592 962 aaKnown RBP15.73■□□□□ 0.11
MKS1-202ENST00000393119 COILP38432 576 aaPredicted RBP15.73■□□□□ 0.11
MKS1-202ENST00000393119 DYNLT1P63172 113 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 ZNF268Q14587 947 aaPredicted RBP15.73■□□□□ 0.11
MKS1-202ENST00000393119 OLFML1Q6UWY5 402 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 CCDC105Q8IYK2 499 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 CRYBG2Q8N1P7 616 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 HSPH1Q92598 858 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 KCNK16Q96T55 309 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 OSBPL8Q9BZF1 889 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 VPS18Q9P253 973 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 STRIP2Q9ULQ0 834 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 LRRD1A4D1F6 860 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 ARVCFO00192 962 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 NBNO60934 754 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 CABYRO75952 493 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 DDHD2O94830 711 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 CPP00450 1065 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 PDGFRAP16234 1089 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 MIPP30301 263 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 VPS41P49754 854 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 KLF1Q13351 362 aaPredicted RBP15.73■□□□□ 0.11
MKS1-202ENST00000393119 FAM26DQ5JW98 314 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 DSTYKQ6XUX3 929 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 UNC93AQ86WB7 457 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 KATNAL2Q8IYT4 538 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 SCLYQ96I15 445 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 SLITRK1Q96PX8 696 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 HESX1Q9UBX0 185 aa15.73■□□□□ 0.11
MKS1-202ENST00000393119 PDCD11Q14690 1871 aaKnown RBP15.73■□□□□ 0.11
MKS1-202ENST00000393119 GOLGA6L10A0A0M3HER8 536 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 PSTPIP1O43586 416 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 PQBP1O60828 265 aaKnown RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 PTPN1P18031 435 aaKnown RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 PNPLA4P41247 253 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 CCDC14Q49A88 953 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 CLLU1OSQ5K130 101 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 PACS2Q86VP3 889 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 SLC43A3Q8NBI5 491 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 LRRN4Q8WUT4 740 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 RTP3Q9BQQ7 232 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 SLC4A5Q9BY07 1137 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 SLITRK6Q9H5Y7 841 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 LRRC4CQ9HCJ2 640 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.72■□□□□ 0.11
MKS1-202ENST00000393119 C2CD4BA6NLJ0 364 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 BHMG1C9JSJ3 638 aaPredicted RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 AGPSO00116 658 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 ZNF623O75123 536 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 RPL21P46778 160 aaKnown RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 BCAR1P56945 870 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 MAP3K7CLP57077 242 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 CORO7P57737 925 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 PITX1P78337 314 aaPredicted RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 MMRN1Q13201 1228 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 PIGHQ14442 188 aaPredicted RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 ZNF598Q86UK7 904 aaKnown RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 ANKRD52Q8NB46 1076 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 GLIS1Q8NBF1 620 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 CCDC26Q8TAB7 109 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 NAP1L3Q99457 506 aaPredicted RBP15.72■□□□□ 0.11
MKS1-202ENST00000393119 KIAA1257Q9ULG3 409 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
MKS1-202ENST00000393119 C3orf70A6NLC5 250 aaPredicted RBP15.71■□□□□ 0.11
MKS1-202ENST00000393119 GABRDO14764 452 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 WARSP23381 471 aaKnown RBP15.71■□□□□ 0.11
MKS1-202ENST00000393119 SCYL2Q6P3W7 929 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 LRRC31Q6UY01 552 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 CYP4V2Q6ZWL3 525 aaPredicted RBP15.71■□□□□ 0.11
MKS1-202ENST00000393119 GPRIN1Q7Z2K8 1008 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 MAATS1Q7Z4T9 603 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 TMEM110Q86TL2 294 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 PIGZQ86VD9 579 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 FAM71BQ8TC56 605 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 RNF208Q9H0X6 261 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 GEMIN8Q9NWZ8 242 aaKnown RBP15.71■□□□□ 0.11
MKS1-202ENST00000393119 DNAJB4Q9UDY4 337 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 ETS1P14921 441 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 MAN1A1P33908 653 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 GGCXP38435 758 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 EPHB4P54760 987 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 ARHGAP17Q68EM7 881 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 DUPD1Q68J44 220 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 SPOCD1Q6ZMY3 1216 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 TOP6BLQ8N6T0 577 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 STKLD1Q8NE28 680 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 DBF4BQ8NFT6 615 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 EXD1Q8NHP7 514 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 PWWP2AQ96N64 755 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 ERP44Q9BS26 406 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 DCLK3Q9C098 648 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 TMPRSS4Q9NRS4 437 aa15.71■□□□□ 0.11
MKS1-202ENST00000393119 TMLHEQ9NVH6 421 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms