RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 C1orf228Q6PIY5 440 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 NLRP9Q7RTR0 991 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 STMN2Q93045 179 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 FAM111AQ96PZ2 611 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-202ENST00000380281 RBM47A0AV96 593 aaKnown RBP13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 JAK3P52333 1124 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 KLF1Q13351 362 aaPredicted RBP13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 ACVR2BQ13705 512 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 MYBPC2Q14324 1141 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 PLEKHG4Q58EX7 1191 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 BSPRYQ5W0U4 402 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 SPATA24Q86W54 205 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 TRAPPC12Q8WVT3 735 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 TFAP2BQ92481 460 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 CYTH2Q99418 400 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 SHCBP1LQ9BZQ2 653 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 MAF1Q9H063 256 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 GPATCH2LQ9NWQ4 482 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 SLC9A2Q9UBY0 812 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 MAGED2Q9UNF1 606 aaPredicted RBP13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 COQ4Q9Y3A0 265 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 HEY1Q9Y5J3 304 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 IKBKGQ9Y6K9 419 aa13.02□□□□□ -0.32
PRPF40B-202ENST00000380281 DNALI1O14645 258 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 ATP2A1O14983 1001 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 OPHN1O60890 802 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 PSMG1O95456 288 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 LMNAP02545 664 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 PTPN4P29074 926 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 IGBP1P78318 339 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 GCNT1Q02742 428 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 SH3PXD2AQ5TCZ1 1133 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 IZUMO2Q6UXV1 221 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 CENPUQ71F23 418 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 PPP1R13LQ8WUF5 828 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 ZNF75CPQ92670 426 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 CCDC97Q96F63 343 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 MECRQ9BV79 373 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 SLC38A10Q9HBR0 1119 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 PARVAQ9NVD7 372 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 EXTL3O43909 919 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 RGS20O76081 388 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 ASMTLO95671 621 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 ITGA2BP08514 1039 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 SLC1A1P43005 524 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 CENPCQ03188 943 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 ZNF252P-AS1Q0IIN9 211 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 UNC45BQ8IWX7 931 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 CLMNQ96JQ2 1002 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 NLRP4Q96MN2 994 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 ASCC2Q9H1I8 757 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 HEY2Q9UBP5 337 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 GINS2Q9Y248 185 aa13.02□□□□□ -0.33
PRPF40B-202ENST00000380281 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 TMCC1O94876 653 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 C4BPAP04003 597 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 ASLP04424 464 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 PSAPP07602 524 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 GLRA2P23416 452 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 THOC5Q13769 683 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 BMPR2Q13873 1038 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 DUS1LQ6P1R4 473 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 UBA3Q8TBC4 463 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 SLC7A3Q8WY07 619 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 PAFAH2Q99487 392 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 CENPKQ9BS16 269 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 DGAT1O75907 488 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 TOP3BO95985 862 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 F7P08709 466 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 ACO1P21399 889 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 BGNP21810 368 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 KLRC2P26717 231 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 CXCL9Q07325 125 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 AP1B1Q10567 949 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 CBX3Q13185 183 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 LRRC36Q1X8D7 754 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 ARHGAP18Q8N392 663 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 ZCCHC9Q8N567 271 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 PPM1NQ8N819 430 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 KCTD6Q8NC69 237 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 NCSTNQ92542 709 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 HAPLN3Q96S86 360 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 CISHQ9NSE2 258 aa13.01□□□□□ -0.33
PRPF40B-202ENST00000380281 DDX18Q9NVP1 670 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms