RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 SCNN1GP51170 649 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 ERVFC1P60507 584 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 ARHGAP17Q68EM7 881 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 EP400NLQ6ZTU2 488 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 UBL4BQ8N7F7 174 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 NOA1Q8NC60 698 aaKnown RBP22.32■■□□□ 1.16
HLA-C-201ENST00000376228 FEZF2Q8TBJ5 459 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 MICAL1Q8TDZ2 1067 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 KBTBD7Q8WVZ9 684 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 ATXN2LQ8WWM7 1075 aaKnown RBP22.32■■□□□ 1.16
HLA-C-201ENST00000376228 IGFLR1Q9H665 355 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 GOLGA2P5Q9HBQ8 144 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 MIOSQ9NXC5 875 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 TMEM59LQ9UK28 342 aa22.32■■□□□ 1.16
HLA-C-201ENST00000376228 SETSIPP0DME0 302 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 WARSP23381 471 aaKnown RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 SSTR3P32745 418 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 MAN1A1P33908 653 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 CTNNA1P35221 906 aaKnown RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PPM1AP35813 382 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PEX5P50542 639 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 KCNQ1P51787 676 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 MRPS5P82675 430 aaKnown RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PLCB3Q01970 1234 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 HYAL1Q12794 435 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PPP1R15BQ5SWA1 713 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 C3orf20Q8ND61 904 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 APPL2Q8NEU8 664 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 RSPH1Q8WYR4 309 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 ASB2Q96Q27 587 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 CHORDC1Q9UHD1 332 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 NME7Q9Y5B8 376 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PCDHA3Q9Y5H8 950 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 HUS1O60921 280 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PROSCO94903 275 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 GALTP07902 379 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 H2AFXP16104 143 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 SLC11A1P49279 550 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 UBE3AQ05086 875 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 ZNF268Q14587 947 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PKDCCQ504Y2 493 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 PLPP4Q5VZY2 271 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 RBM23Q86U06 439 aaKnown RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 BCL7CQ8WUZ0 217 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 DDX27Q96GQ7 796 aaKnown RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 MS4A14Q96JA4 679 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 FAM193BQ96PV7 902 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 MIS12Q9H081 205 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 UBE2ZQ9H832 354 aaPredicted RBP22.31■■□□□ 1.16
HLA-C-201ENST00000376228 ANKZF1Q9H8Y5 726 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 L1RE1Q9UN81 338 aa22.31■■□□□ 1.16
HLA-C-201ENST00000376228 FAM170AA1A519 330 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 TARSL2A2RTX5 802 aaKnown RBP22.3■■□□□ 1.16
HLA-C-201ENST00000376228 TMEM191CA6NGB0 347 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 PGRMC1O00264 195 aaKnown RBP22.3■■□□□ 1.16
HLA-C-201ENST00000376228 GNL1P36915 607 aaPredicted RBP22.3■■□□□ 1.16
HLA-C-201ENST00000376228 KRT17Q04695 432 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 GRIK3Q13003 919 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 PTPN20Q4JDL3 420 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 OR6B3Q8NGW1 331 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 SPATA18Q8TC71 538 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 C18orf8Q96DM3 657 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 ENTPD7Q9NQZ7 604 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 CLDND1Q9NY35 253 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 KANSL3Q9P2N6 904 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 CYTH4Q9UIA0 394 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 RAB21Q9UL25 225 aa22.3■■□□□ 1.16
HLA-C-201ENST00000376228 C5orf42Q9H799 3197 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 CEP104O60308 925 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 KCNA5P22460 613 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 AARSP49588 968 aaKnown RBP eCLIP22.29■■□□□ 1.16
HLA-C-201ENST00000376228 ORC1Q13415 861 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 C2CD6Q53TS8 623 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 STK32AQ8WU08 396 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 RUBCNQ92622 972 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 TMEM169Q96HH4 297 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 BTBD6Q96KE9 485 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 UROC1Q96N76 676 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 TCF25Q9BQ70 676 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 SNX25Q9H3E2 840 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 IP6K2Q9UHH9 426 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 TSPAN16Q9UKR8 245 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 LZTS1Q9Y250 596 aa22.29■■□□□ 1.16
HLA-C-201ENST00000376228 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.28■■□□□ 1.16
HLA-C-201ENST00000376228 SIGLEC16A6NMB1 481 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 TMEM110-MUSTN1A8MSY1 372 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 A8MXQ7 604 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 M0QYV0 167 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 GABRDO14764 452 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 PER2O15055 1255 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 LINC01565O15544 149 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 SPOPO43791 374 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 NRIP1P48552 1158 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 DNA2P51530 1060 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 GLE1Q53GS7 698 aaKnown RBP22.28■■□□□ 1.16
HLA-C-201ENST00000376228 TJAP1Q5JTD0 557 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 DCAF12L1Q5VU92 463 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 DNAJC24Q6P3W2 148 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 ACOT1Q86TX2 421 aa22.28■■□□□ 1.16
HLA-C-201ENST00000376228 TMEM86AQ8N2M4 240 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms