RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 HAS1Q92839 578 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 EFCAB1Q9HAE3 211 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 SCHIP1Q9P0W5 487 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 TSR3Q9UJK0 312 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 C16orf96A6NNT2 1141 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 MAN1A2O60476 641 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 VDRP11473 427 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 GRK2P25098 689 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 ELK3P41970 407 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 RRP1BQ14684 758 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 AADACL2Q6P093 401 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 TAS2R42Q7RTR8 314 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 MICALL2Q8IY33 904 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 PDCD2LQ9BRP1 358 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 TAS2R14Q9NYV8 317 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 FCHO1O14526 889 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 ATP9AO75110 1047 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 RALBP11234 206 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 TAL1P17542 331 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 HSPA13P48723 471 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 CNGA2Q16280 664 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 ANO4Q32M45 955 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 NAIF1Q69YI7 327 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 CKAP2Q8WWK9 683 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 KAT5Q92993 513 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 DACH2Q96NX9 599 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 ASCC2Q9H1I8 757 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 NDFIP2Q9NV92 336 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 GPATCH2LQ9NWQ4 482 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 MAP3K20Q9NYL2 800 aaKnown RBP11.97□□□□□ -0.49
PTCH1-203ENST00000375274 ERAP1Q9NZ08 941 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 KIF17Q9P2E2 1029 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 BLOC1S6Q9UL45 172 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 DNPEPQ9ULA0 475 aa11.97□□□□□ -0.49
PTCH1-203ENST00000375274 TPST1O60507 370 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 SOX11P35716 441 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 TCF7P36402 384 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-203ENST00000375274 CDC42EP1Q00587 391 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 FUT2Q10981 343 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 ETNPPLQ8TBG4 499 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 STK32AQ8WU08 396 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-203ENST00000375274 KIAA1257Q9ULG3 409 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 LZTS1Q9Y250 596 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 WTIPA6NIX2 430 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-203ENST00000375274 BTNL10A8MVZ5 291 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 PTK6Q13882 451 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 RBBP7Q16576 425 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 DENND5BQ6ZUT9 1274 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 PRELID2Q8N945 189 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 CERKQ8TCT0 537 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 FAM172AQ8WUF8 416 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 ZNF75CPQ92670 426 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-203ENST00000375274 CNDP1Q96KN2 507 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 CNBD2Q96M20 576 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 BTBD10Q9BSF8 475 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 CTNNAL1Q9UBT7 734 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 TRPC5OSA6NMA1 111 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 H0Y626 953 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 TRIM16O95361 564 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 HMOX2P30519 316 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 SERPINB5P36952 375 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 RPL10AP62906 217 aaKnown RBP11.96□□□□□ -0.49
PTCH1-203ENST00000375274 SLC34A1Q06495 639 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 PCSK7Q16549 785 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 FAM83EQ2M2I3 478 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 DENND1BQ6P3S1 775 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 SHCBP1Q8NEM2 672 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 CHST13Q8NET6 341 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 ELMO3Q96BJ8 720 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 MYLK2Q9H1R3 596 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 IL1RL2Q9HB29 575 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 GID8Q9NWU2 228 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTCH1-203ENST00000375274 PCYOX1Q9UHG3 505 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 SLC13A4Q9UKG4 626 aa11.96□□□□□ -0.49
PTCH1-203ENST00000375274 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 TIMM44O43615 452 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 NUDT17P0C025 328 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 ADRA1DP25100 572 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 GNL1P36915 607 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-203ENST00000375274 CACNA2D1P54289 1103 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 PTPN11Q06124 597 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-203ENST00000375274 PPATQ06203 517 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 PPP3CAQ08209 521 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 MTFR1Q15390 333 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 SYTL5Q8TDW5 730 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-203ENST00000375274 AGAP11Q8TF27 550 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 RXFP2Q8WXD0 754 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 JADE3Q92613 823 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 FAM8A1Q9UBU6 413 aa11.96□□□□□ -0.5
PTCH1-203ENST00000375274 SUPT20HL2P0C7V6 817 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 CNTFP26441 200 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 SOX10P56693 466 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 DAB2P98082 770 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 PREPLQ4J6C6 727 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 PRCCQ92733 491 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms