RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 PKMYT1Q99640 499 aa18.53■□□□□ 0.56
PFDN6-201ENST00000374606 HNRNPABQ99729 332 aaKnown RBP18.53■□□□□ 0.56
PFDN6-201ENST00000374606 ZCWPW1Q9H0M4 648 aa18.53■□□□□ 0.56
PFDN6-201ENST00000374606 MTRRQ9UBK8 725 aa18.53■□□□□ 0.56
PFDN6-201ENST00000374606 NAGPAQ9UK23 515 aa18.53■□□□□ 0.56
PFDN6-201ENST00000374606 GTF3C4Q9UKN8 822 aa18.53■□□□□ 0.56
PFDN6-201ENST00000374606 ZKSCAN5Q9Y2L8 839 aa18.53■□□□□ 0.56
PFDN6-201ENST00000374606 USP15Q9Y4E8 981 aaPredicted RBP18.53■□□□□ 0.56
PFDN6-201ENST00000374606 TMCO5BA8MYB1 307 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 C2CD2LO14523 706 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 ZNF263O14978 683 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 GFRA3O60609 400 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 CPB1P15086 417 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 NRIP1P48552 1158 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 BCAT1P54687 386 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 NOMO3P69849 1222 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 SIGLEC14Q08ET2 396 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 NAA35Q5VZE5 725 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 PPP1R2P3Q6NXS1 205 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 FAM171BQ6P995 826 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 C4orf50Q6ZRC1 276 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 FAM35AQ86V20 835 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 FUKQ8N0W3 1084 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 TMEM35BQ8NCS4 154 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 C1orf131Q8NDD1 294 aaKnown RBP18.52■□□□□ 0.56
PFDN6-201ENST00000374606 POF1BQ8WVV4 589 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 PCED1BQ96HM7 432 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 PHF7Q9BWX1 381 aaPredicted RBP18.52■□□□□ 0.56
PFDN6-201ENST00000374606 ZBP1Q9H171 429 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 LHX5Q9H2C1 402 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 NENFQ9UMX5 172 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 LZTS1Q9Y250 596 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 BACE2Q9Y5Z0 518 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 ADGRG1Q9Y653 693 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 USP34Q70CQ2 3546 aa18.52■□□□□ 0.56
PFDN6-201ENST00000374606 OR4Q2P0C623 313 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 GZMAP12544 262 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 UNGP13051 313 aaPredicted RBP18.51■□□□□ 0.55
PFDN6-201ENST00000374606 CDH5P33151 784 aaPredicted RBP18.51■□□□□ 0.55
PFDN6-201ENST00000374606 NSFP46459 744 aaKnown RBP18.51■□□□□ 0.55
PFDN6-201ENST00000374606 CREMQ03060 361 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 CENPCQ03188 943 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 NFE2Q16621 373 aaPredicted RBP18.51■□□□□ 0.55
PFDN6-201ENST00000374606 SLC39A12Q504Y0 691 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 C10orf76Q5T2E6 689 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 KIAA1328Q86T90 577 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 GPR65Q8IYL9 337 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 TXLNBQ8N3L3 684 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 B3GNT5Q9BYG0 378 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 ZNF518BQ9C0D4 1074 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 IRF2BPLQ9H1B7 796 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 MRPL17Q9NRX2 175 aaKnown RBP18.51■□□□□ 0.55
PFDN6-201ENST00000374606 KRT82Q9NSB4 513 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 TAS2R14Q9NYV8 317 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 SSX2IPQ9Y2D8 614 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 REXO2Q9Y3B8 237 aaKnown RBP18.51■□□□□ 0.55
PFDN6-201ENST00000374606 CDY1Q9Y6F8 540 aa18.51■□□□□ 0.55
PFDN6-201ENST00000374606 FAM170AA1A519 330 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 TBC1D4O60343 1298 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 RTN2O75298 545 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 GLP2RO95838 553 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 FAM200BP0CF97 657 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 SETSIPP0DME0 302 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 CTSAP10619 480 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 CA8P35219 290 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 MAGEA1P43355 309 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 ARPP19P56211 112 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 SLC8A3P57103 927 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 UBE3AQ05086 875 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 BST2Q10589 180 aaKnown RBP18.5■□□□□ 0.55
PFDN6-201ENST00000374606 ACAD10Q6JQN1 1059 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 RBM23Q86U06 439 aaKnown RBP18.5■□□□□ 0.55
PFDN6-201ENST00000374606 LRRTM3Q86VH5 581 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 TTC30AQ86WT1 665 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 SPATA2LQ8IUW3 424 aaPredicted RBP18.5■□□□□ 0.55
PFDN6-201ENST00000374606 ANKRD52Q8NB46 1076 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 UBA3Q8TBC4 463 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 SECISBP2LQ93073 1101 aaKnown RBP18.5■□□□□ 0.55
PFDN6-201ENST00000374606 SMARCD1Q96GM5 515 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 NOX5Q96PH1 765 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.5■□□□□ 0.552e-7■■■■■ 40.2
PFDN6-201ENST00000374606 TMLHEQ9NVH6 421 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 FAM86C1Q9NVL1 165 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 PPP2R2CQ9Y2T4 447 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 PCDHA13Q9Y5I0 950 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 PTPRDP23468 1912 aa18.5■□□□□ 0.55
PFDN6-201ENST00000374606 CLDN5O00501 218 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 CCP110O43303 1012 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 H2AFZP0C0S5 128 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 VAV2P52735 878 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 VCPP55072 806 aaKnown RBP18.49■□□□□ 0.55
PFDN6-201ENST00000374606 GPR17Q13304 367 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 PTPN14Q15678 1187 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 PKDCCQ504Y2 493 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 SLC8B1Q6J4K2 584 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 H2AFVQ71UI9 128 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 MSANTD4Q8NCY6 345 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 CPA5Q8WXQ8 436 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 RPGRIP1Q96KN7 1286 aa18.49■□□□□ 0.55
PFDN6-201ENST00000374606 ISCUQ9H1K1 167 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms