RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 SLITRK1Q96PX8 696 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 KCNK16Q96T55 309 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 INTS2Q9H0H0 1204 aaKnown RBP12.74□□□□□ -0.37
HDAC8-201ENST00000373554 MFSD1Q9H3U5 465 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 TRPM5Q9NZQ8 1165 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 TMEM63CQ9P1W3 806 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 WNT16Q9UBV4 365 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 NFE2L3Q9Y4A8 694 aa12.74□□□□□ -0.37
HDAC8-201ENST00000373554 HEPACAM2A8MVW5 462 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 KCNJ18B7U540 433 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 TADA3O75528 432 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-201ENST00000373554 PSMC3P17980 439 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 RFX1P22670 979 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 EEF1GP26641 437 aaKnown RBP12.73□□□□□ -0.37
HDAC8-201ENST00000373554 YWHAQP27348 245 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 WEE1P30291 646 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 VIPR2P41587 438 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 PPP3CCP48454 512 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 PDE6CP51160 858 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 SLC5A3P53794 718 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 RAD23BP54727 409 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 MAP3K7CLP57077 242 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 USP46P62068 366 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 GPC5P78333 572 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 GCNT1Q02742 428 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 IFRD2Q12894 506 aaPredicted RBP12.73□□□□□ -0.37
HDAC8-201ENST00000373554 GRM2Q14416 872 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 KCNJ12Q14500 433 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 HSP90AA4PQ58FG1 418 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 TXNDC8Q6A555 127 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
HDAC8-201ENST00000373554 VITQ6UXI7 678 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 MON1AQ86VX9 555 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 YAF2Q8IY57 180 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 CMTM8Q8IZV2 173 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 SIX5Q8N196 739 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 SLC4A11Q8NBS3 891 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 PDZD8Q8NEN9 1154 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 LMO3Q8TAP4 145 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 SMOQ99835 787 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 TRMT61BQ9BVS5 477 aaKnown RBP12.73□□□□□ -0.37
HDAC8-201ENST00000373554 SLC46A2Q9BY10 475 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 PLA2G2FQ9BZM2 168 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 BRD9Q9H8M2 597 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 KIF9Q9HAQ2 790 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 CSNK1G1Q9HCP0 422 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 ARHGEF3Q9NR81 526 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 OBP2AQ9NY56 170 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 TECTAO75443 2155 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 MYO10Q9HD67 2058 aa12.73□□□□□ -0.37
HDAC8-201ENST00000373554 NUP210Q8TEM1 1887 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-201ENST00000373554 TRAV19A0A0A6YYK7 116 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 GTPBP10A4D1E9 387 aaKnown RBP12.72□□□□□ -0.37
HDAC8-201ENST00000373554 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 CKMP06732 381 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 CD19P15391 556 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 NPR3P17342 541 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 SLC8A3P57103 927 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 TAF10Q12962 218 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 EXOC3L4Q17RC7 722 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 SGO2Q562F6 1265 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 PPP1R26Q5T8A7 1209 aaPredicted RBP12.72□□□□□ -0.37
HDAC8-201ENST00000373554 TRIM65Q6PJ69 517 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 TMEM270Q6UE05 265 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 GBP6Q6ZN66 633 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 CLEC20AQ6ZU45 233 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 ARHGEF19Q8IW93 802 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 MFSD6LQ8IWD5 586 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 FBXL6Q8N531 539 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 ZMIZ2Q8NF64 920 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 OVCA2Q8WZ82 227 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 DNASE1L2Q92874 299 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 IRF7Q92985 503 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 TUBGCP2Q9BSJ2 902 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 CRACR2AQ9BSW2 395 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 FBXO44Q9H4M3 255 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 PNPLA8Q9NP80 782 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 CA14Q9ULX7 337 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 OBSL1O75147 1896 aa12.72□□□□□ -0.37
HDAC8-201ENST00000373554 NCANO14594 1321 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 PES1O00541 588 aaKnown RBP12.71□□□□□ -0.37
HDAC8-201ENST00000373554 TNFRSF10BO14763 440 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 ZNF263O14978 683 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 BEST1O76090 585 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 ABL1P00519 1130 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 TPM2P07951 284 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 PAEPP09466 180 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 USP17L7P0C7H9 530 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 PFKLP17858 780 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 GDI1P31150 447 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 MYL5Q02045 173 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 TYRO3Q06418 890 aa12.71□□□□□ -0.37
HDAC8-201ENST00000373554 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms