RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 ENGASEQ8NFI3 743 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 EEF2KMTQ96G04 330 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 SPATA17Q96L03 361 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 KCNK16Q96T55 309 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 SCAND2PQ9GZW5 306 aaPredicted RBP11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 SNX25Q9H3E2 840 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 EBF3Q9H4W6 596 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 APOBEC3GQ9HC16 384 aaKnown RBP11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 POLR3BQ9NW08 1133 aaPredicted RBP11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 FBXO4Q9UKT5 387 aa11.72□□□□□ -0.53
EXOSC1-202ENST00000370885 HELZP42694 1942 aaKnown RBP11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 LILRB5O75023 590 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 MYL1P05976 194 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 FAM163BP0C2L3 166 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 ATICP31939 592 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 AVPR1AP37288 418 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 GRIK1P39086 918 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 TNNC1P63316 161 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 BIRC3Q13489 604 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 TRPC3Q13507 836 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 PNOCQ13519 176 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 CCINQ13939 588 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF77Q15935 545 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF528Q3MIS6 628 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 CEP135Q66GS9 1140 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 VSTM1Q6UX27 236 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 C4orf50Q6ZRC1 276 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 ZBTB44Q8NCP5 570 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 ZMIZ2Q8NF64 920 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 GOLGA5Q8TBA6 731 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 CSGALNACT1Q8TDX6 532 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 MRPS31Q92665 395 aaKnown RBP11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 EZH1Q92800 747 aaPredicted RBP11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 GCNAQ96QF7 691 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 TWNKQ96RR1 684 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 TTLL2Q9BWV7 592 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 RNF38Q9H0F5 515 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 LINC00597Q9H2U6 94 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 TRPC7Q9HCX4 862 aa11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 MRPS17Q9Y2R5 130 aaKnown RBP11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 R3HCC1Q9Y3T6 440 aaKnown RBP11.71□□□□□ -0.53
EXOSC1-202ENST00000370885 ZNF840PA6NDX5 716 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 A8MXQ7 604 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 K7ESF4 209 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 NCAM2O15394 837 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 PHACTR2O75167 634 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 BEST1O76090 585 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 ASS1P00966 412 aaKnown RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 HLA-DRAP01903 254 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 LMNAP02545 664 aaKnown RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 DDX6P26196 483 aaKnown RBP eCLIP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 MAGEA9P43362 315 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 ASPAP45381 313 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 PMS1P54277 932 aaKnown RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 MCCD1P59942 119 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 USP4Q13107 963 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 RUNX3Q13761 415 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 ZNF268Q14587 947 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 KCNB1Q14721 858 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 NFIL3Q16649 462 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 ZNF699Q32M78 642 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 ITPRIPL2Q3MIP1 535 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 FSTL4Q6MZW2 842 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 MAMSTRQ6ZN01 415 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 ACOT1Q86TX2 421 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 RALGPS2Q86X27 583 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 FUKQ8N0W3 1084 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 GUF1Q8N442 669 aaKnown RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 B3GALNT2Q8NCR0 500 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 SCAMP5Q8TAC9 235 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 SYAP1Q96A49 352 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 C8orf48Q96LL4 319 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 C8orf33Q9H7E9 229 aaPredicted RBP11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 WNT6Q9Y6F9 365 aa11.7□□□□□ -0.54
EXOSC1-202ENST00000370885 SOBPA7XYQ1 873 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 TNFRSF10BO14763 440 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 SCAMP3O14828 347 aaKnown RBP11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 CCDC130P13994 396 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 NR2F2P24468 414 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 GCLMP48507 274 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 VAMP7P51809 220 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 NOP14P78316 857 aaKnown RBP11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 PLCB2Q00722 1185 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 FAM160A1Q05DH4 1040 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 TAF10Q12962 218 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 MTF1Q14872 753 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 MAPRE1Q15691 268 aaKnown RBP11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 GAB4Q2WGN9 574 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 ZNF667Q5HYK9 610 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 DENND5BQ6ZUT9 1274 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 FAM35AQ86V20 835 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 C12orf29Q8N999 325 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 TTC16Q8NEE8 873 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 TAS1R2Q8TE23 839 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 SH3RF2Q8TEC5 729 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 WHAMMQ8TF30 809 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 SEMA4DQ92854 862 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 WBP2Q969T9 261 aa11.69□□□□□ -0.54
EXOSC1-202ENST00000370885 SMOQ99835 787 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms