RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 KCNK16Q96T55 309 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 NRDE2Q9H7Z3 1164 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 KRT82Q9NSB4 513 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 HESX1Q9UBX0 185 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 RAB21Q9UL25 225 aa14.85□□□□□ -0.03
HMGCS2-201ENST00000369406 KIAA1671Q9BY89 1806 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 PI4K2BG5E9Z4 385 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 KRIT1O00522 736 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 RAD51CO43502 376 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 LRCH4O75427 683 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 CYP11A1P05108 521 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 GLI1P08151 1106 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 LCP1P13796 627 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 PSMA2P25787 234 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 OR1G1P47890 313 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 NDUFV1P49821 464 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 RWDD2BP57060 319 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 SLC25A11Q02978 314 aaKnown RBP14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 C1orf53Q5VUE5 145 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 DCLRE1AQ6PJP8 1040 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 PIGZQ86VD9 579 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 TMEM86AQ8N2M4 240 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 NIPA2Q8N8Q9 360 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 TNIP3Q96KP6 325 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 PEBP4Q96S96 227 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 SMOQ99835 787 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 DUSP16Q9BY84 665 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 MYO16Q9Y6X6 1858 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 TRIM43BA6NCK2 446 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 C2CD4BA6NLJ0 364 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 SETSIPP0DME0 302 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 ODC1P11926 461 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 SSR1P43307 286 aaKnown RBP14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 CYP4V2Q6ZWL3 525 aaPredicted RBP14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 FAM35AQ86V20 835 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 PRELID2Q8N945 189 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 IPO4Q8TEX9 1081 aaKnown RBP14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 BCL7CQ8WUZ0 217 aaPredicted RBP14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 MYLPFQ96A32 169 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 TRIM43Q96BQ3 446 aaPredicted RBP14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 UROC1Q96N76 676 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 MARCH5Q9NX47 278 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
HMGCS2-201ENST00000369406 ESYT3A0FGR9 886 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 OR4Q2P0C623 313 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 PLA2G4AP47712 749 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 LHX1P48742 406 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 ADCY1Q08828 1119 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 TTC27Q6P3X3 843 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 SLC13A5Q86YT5 568 aaPredicted RBP14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 RXFP2Q8WXD0 754 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 CFAP57Q96MR6 1250 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 ELAC1Q9H777 363 aaKnown RBP14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 CALCOCO1Q9P1Z2 691 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 WDR35Q9P2L0 1181 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 PSTPIP1O43586 416 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM163BP0C2L3 166 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 HSPA1AP0DMV8 641 aaKnown RBP14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 HSPA1BP0DMV9 641 aaKnown RBP14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 RARAP10276 462 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 NPR3P17342 541 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 MAP3K7CLP57077 242 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 SLC6A3Q01959 620 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 RNASELQ05823 741 aaKnown RBP14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 SMTNL2Q2TAL5 461 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 CCDC14Q49A88 953 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 KCNT1Q5JUK3 1230 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 RHOT1Q8IXI2 618 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 MYCBPAPQ8TBZ2 947 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 URGCPQ8TCY9 931 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 STK32AQ8WU08 396 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 RAPGEF5Q92565 580 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 MED10Q9BTT4 135 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 C11orf49Q9H6J7 331 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 TMEM39AQ9NV64 488 aa14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 R3HDM2Q9Y2K5 976 aaKnown RBP14.83□□□□□ -0.04
HMGCS2-201ENST00000369406 NT5C1B-RDH14C9J2C7 533 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 XPO1O14980 1071 aaKnown RBP14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 SLC11A1P49279 550 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 TAP1Q03518 808 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 ADIGQ0VDE8 80 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM171BQ6P995 826 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 KATNAL2Q8IYT4 538 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 APBB2Q92870 758 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 RNF25Q96BH1 459 aaPredicted RBP14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 FAM118BQ9BPY3 351 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 HEMGNQ9BXL5 484 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 CDH9Q9ULB4 789 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 LAMA3Q16787 3333 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 HHLA1C9JL84 531 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 NRP1O14786 923 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 SART1O43290 800 aaKnown RBP14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 UPP2O95045 317 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 CLTBP09497 229 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 ATXN1P54253 815 aaKnown RBP14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 PLCB3Q01970 1234 aa14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 PIGHQ14442 188 aaPredicted RBP14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 INTS6LQ5JSJ4 861 aaKnown RBP14.82□□□□□ -0.04
HMGCS2-201ENST00000369406 OVOS1Q6IE37 1185 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms