RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TCRBV5S4A2TA0A5A2 114 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 AKAP3O75969 853 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 SNRPFP62306 86 aaKnown RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 CLEC16AQ2KHT3 1053 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 TFAP2DQ7Z6R9 452 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 SLFN11Q7Z7L1 901 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 MIER2Q8N344 545 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 KIF2BQ8N4N8 673 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 KRT35Q92764 455 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 KCNB2Q92953 911 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 OSBPL1AQ9BXW6 950 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 CISHQ9NSE2 258 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 ARHGAP26Q9UNA1 814 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 AP3B1O00203 1094 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 CDH16O75309 829 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 VEGFAP15692 232 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 RGS4P49798 205 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 UBE3AQ05086 875 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 BFSP2Q13515 415 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 POLD3Q15054 466 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 PRAMEF19Q5SWL8 479 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 ZNF473Q8WTR7 871 aaKnown RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 TMEM121Q9BTD3 319 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 IARS2Q9NSE4 1012 aaKnown RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 RRM1P23921 792 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 TKTL1P51854 596 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 SEPT8Q92599 483 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 MAGEB10Q96LZ2 347 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-207ENST00000368226 ZSWIM1Q9BR11 485 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 CYP4F12Q9HCS2 524 aa13.39□□□□□ -0.27
PTPRK-207ENST00000368226 TRIM49D1C9J1S8 452 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 VDRP11473 427 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 POU4F1Q01851 419 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 MAPRE1Q15691 268 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 METTL7BQ6UX53 244 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 CLEC17AQ6ZS10 378 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 TLK2Q86UE8 772 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 ERP44Q9BS26 406 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SMG5Q9UPR3 1016 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 RPS6KL1Q9Y6S9 549 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SNRPAP09012 282 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 ZNF720Q7Z2F6 126 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SLC13A5Q86YT5 568 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 PCSK9Q8NBP7 692 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 STOML1Q9UBI4 398 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SPASTQ9UBP0 616 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 CFAP99D6REC4 459 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 GAS2O43903 313 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 PWP1Q13610 501 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 EPS8L3Q8TE67 593 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SELENONQ9NZV5 590 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 TRIM17Q9Y577 477 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 CENPAP49450 140 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SERPINB9P50453 376 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 OXCT1P55809 520 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 OTUD4Q01804 1114 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 MFSD10Q14728 455 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 PARP9Q8IXQ6 854 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 JADE3Q92613 823 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 ERP27Q96DN0 273 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 THTPAQ9BU02 230 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 FICDQ9BVA6 458 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 MRPL1Q9BYD6 325 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 NT5MQ9NPB1 228 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 C6orf203Q9P0P8 240 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SCAMP3O14828 347 aaKnown RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 ITGB6P18564 788 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 ALDH5A1P51649 535 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 SH3BGRP55822 239 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-207ENST00000368226 GALNTL6Q49A17 601 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 CALML6Q8TD86 181 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 TMEM176AQ96HP8 235 aa13.38□□□□□ -0.27
PTPRK-207ENST00000368226 CKBP12277 381 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CENPCQ03188 943 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 TMEM132BQ14DG7 1078 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 GALNT4Q8N4A0 578 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 FBXO36Q8NEA4 188 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CASKIN2Q8WXE0 1202 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 FAM111AQ96PZ2 611 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 MYCBPQ99417 103 aaPredicted RBP13.37□□□□□ -0.27
PTPRK-207ENST00000368226 EHD4Q9H223 541 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 TRMT6Q9UJA5 497 aaKnown RBP13.37□□□□□ -0.27
PTPRK-207ENST00000368226 DDR1Q08345 913 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 C16orf87Q6PH81 154 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 PRPF39Q86UA1 669 aaKnown RBP13.37□□□□□ -0.27
PTPRK-207ENST00000368226 CYGBQ8WWM9 190 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 XPNPEP3Q9NQH7 507 aa13.37□□□□□ -0.27
PTPRK-207ENST00000368226 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms