RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 PPP1R26Q5T8A7 1209 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-202ENST00000357490 GRASPQ7Z6J2 395 aaPredicted RBP17.05■□□□□ 0.32
COPS7B-202ENST00000357490 FAM35AQ86V20 835 aa17.05■□□□□ 0.32
COPS7B-202ENST00000357490 SCN4BQ8IWT1 228 aa17.05■□□□□ 0.32
COPS7B-202ENST00000357490 STKLD1Q8NE28 680 aa17.05■□□□□ 0.32
COPS7B-202ENST00000357490 GIPC2Q8TF65 315 aa17.05■□□□□ 0.32
COPS7B-202ENST00000357490 SHC3Q92529 594 aa17.05■□□□□ 0.32
COPS7B-202ENST00000357490 HNRNPABQ99729 332 aaKnown RBP17.05■□□□□ 0.32
COPS7B-202ENST00000357490 NAA15Q9BXJ9 866 aaKnown RBP17.05■□□□□ 0.32
COPS7B-202ENST00000357490 MFSD1Q9H3U5 465 aa17.05■□□□□ 0.32
COPS7B-202ENST00000357490 IFNKQ9P0W0 207 aa17.05■□□□□ 0.32
COPS7B-202ENST00000357490 DNMT3BQ9UBC3 853 aaKnown RBP17.05■□□□□ 0.32
COPS7B-202ENST00000357490 FOXN3O00409 490 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 PDGFBP01127 241 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 POU2F2P09086 479 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 PAEPP09466 180 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 PNMA6AP0CW24 399 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 CD19P15391 556 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 GBP2P32456 591 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 USP8P40818 1118 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 ZNF132P52740 706 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 POLR2FP61218 127 aaKnown RBP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 TCF15Q12870 199 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 PLD1Q13393 1074 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 DRAP1Q14919 205 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 VSTM1Q6UX27 236 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 HS6ST3Q8IZP7 471 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 TFAP2BQ92481 460 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 ZNF512Q96ME7 567 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 KCNK16Q96T55 309 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 ZSWIM1Q9BR11 485 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 GPR88Q9GZN0 384 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 DNAI2Q9GZS0 605 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 KCNK12Q9HB15 430 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 KRT82Q9NSB4 513 aa17.04■□□□□ 0.32
COPS7B-202ENST00000357490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.04■□□□□ 0.32
COPS7B-202ENST00000357490 F8VP50 259 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 BEST1O76090 585 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 VDRP11473 427 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 PTPN2P17706 415 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 RPL10AP62906 217 aaKnown RBP17.03■□□□□ 0.32
COPS7B-202ENST00000357490 SGO2Q562F6 1265 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 ARHGAP17Q68EM7 881 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 DNAJB7Q7Z6W7 309 aaPredicted RBP17.03■□□□□ 0.32
COPS7B-202ENST00000357490 ELMOD1Q8N336 334 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 NEK11Q8NG66 645 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 NXPE3Q969Y0 559 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 SMARCD1Q96GM5 515 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 SMOQ99835 787 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 CORO1BQ9BR76 489 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 SMOC2Q9H3U7 446 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 ACP6Q9NPH0 428 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 NLRC4Q9NPP4 1024 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 DUSP12Q9UNI6 340 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 NOTCH4Q99466 2003 aa17.03■□□□□ 0.32
COPS7B-202ENST00000357490 ATP8B3O60423 1300 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 CYP26A1O43174 497 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 AP1G2O75843 785 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 RHOP08100 348 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 RFX1P22670 979 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 BRD2P25440 801 aaKnown RBP17.02■□□□□ 0.32
COPS7B-202ENST00000357490 CLCN5P51795 746 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 VEPH1Q14D04 833 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 ASTLQ6HA08 431 aaPredicted RBP17.02■□□□□ 0.32
COPS7B-202ENST00000357490 ZMIZ2Q8NF64 920 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 PSMG2Q969U7 264 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 C8orf48Q96LL4 319 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 LRRC3Q9BY71 257 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 STK33Q9BYT3 514 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 XPO4Q9C0E2 1151 aaKnown RBP17.02■□□□□ 0.32
COPS7B-202ENST00000357490 ZNF334Q9HCZ1 680 aaPredicted RBP17.02■□□□□ 0.32
COPS7B-202ENST00000357490 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 KIAA1257Q9ULG3 409 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 ASB3Q9Y575 518 aa17.02■□□□□ 0.32
COPS7B-202ENST00000357490 USP34Q70CQ2 3546 aa17.02■□□□□ 0.31
COPS7B-202ENST00000357490 MYH10P35580 1976 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 A0A1W2PQC6 194 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 SLC38A8A6NNN8 435 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 O00370 1275 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 TRIM66O15016 1216 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 GALR2O43603 387 aaPredicted RBP17.01■□□□□ 0.31
COPS7B-202ENST00000357490 FAM200BP0CF97 657 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 HMGA1P17096 107 aaKnown RBP17.01■□□□□ 0.31
COPS7B-202ENST00000357490 ANXA13P27216 316 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 CLCN1P35523 988 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 MAP3K7CLP57077 242 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 GOLGA7BQ2TAP0 167 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 PABPC1LQ4VXU2 614 aaKnown RBP17.01■□□□□ 0.31
COPS7B-202ENST00000357490 CLEC20AQ6ZU45 233 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 FAM71AQ8IYT1 594 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 CSNK1G1Q9HCP0 422 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 DMAP1Q9NPF5 467 aaPredicted RBP17.01■□□□□ 0.31
COPS7B-202ENST00000357490 TSPAN16Q9UKR8 245 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 FBXL21Q9UKT6 434 aa17.01■□□□□ 0.31
COPS7B-202ENST00000357490 ZFP37Q9Y6Q3 630 aaPredicted RBP17.01■□□□□ 0.31
COPS7B-202ENST00000357490 F8VZ95 297 aa17■□□□□ 0.31
COPS7B-202ENST00000357490 NRG2O14511 850 aaPredicted RBP17■□□□□ 0.31
COPS7B-202ENST00000357490 AP5Z1O43299 807 aa17■□□□□ 0.31
COPS7B-202ENST00000357490 MYL4P12829 197 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms