RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 SERPINE1P05121 402 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 PON1P27169 355 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 RPL21P46778 160 aaKnown RBP6.83□□□□□ -1.32
TRIM38-201ENST00000357085 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
TRIM38-201ENST00000357085 HP1BP3Q5SSJ5 553 aaPredicted RBP6.83□□□□□ -1.32
TRIM38-201ENST00000357085 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 GRPEL2Q8TAA5 225 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 FNDC8Q8TC99 324 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 GIPC3Q8TF64 312 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 OSCP1Q8WVF1 389 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 TSPAN17Q96FV3 270 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 OSBPL6Q9BZF3 934 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 SLC38A10Q9HBR0 1119 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 ASNSD1Q9NWL6 643 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 IGSF9Q9P2J2 1179 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 SLC8A2Q9UPR5 921 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 GPC4O75487 556 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 ITGAVP06756 1048 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 CPA2P48052 419 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 SPRED3Q2MJR0 410 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 XKRXQ6PP77 449 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 TMEM35BQ8NCS4 154 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 NLRP4Q96MN2 994 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 TUBA1CQ9BQE3 449 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 ZC3H7BQ9UGR2 993 aaKnown RBP6.83□□□□□ -1.32
TRIM38-201ENST00000357085 WBP11Q9Y2W2 641 aaKnown RBP6.83□□□□□ -1.32
TRIM38-201ENST00000357085 FCHO1O14526 889 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 TBC1D4O60343 1298 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 ARSEP51690 589 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 VCPP55072 806 aaKnown RBP6.83□□□□□ -1.32
TRIM38-201ENST00000357085 KCTD21Q4G0X4 260 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 ASRGL1Q7L266 308 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 TRABD2AQ86V40 505 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 TRIM69Q86WT6 500 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 RDM1Q8NG50 284 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 DEPDC1BQ8WUY9 529 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 C1orf54Q8WWF1 131 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 FBXO28Q9NVF7 368 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 NWD2Q9ULI1 1742 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 PP2D1A8MPX8 630 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 FTLP02792 175 aaPredicted RBP6.83□□□□□ -1.32
TRIM38-201ENST00000357085 PAMP19021 973 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 DNAJB1P25685 340 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 BLVRAP53004 296 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 TMCO4Q5TGY1 634 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 PLEKHA7Q6IQ23 1121 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 KIAA1841Q6NSI8 718 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 LINC00299Q6ZSB3 139 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 SMYD1Q8NB12 490 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 COQ7Q99807 217 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 PSMD13Q9UNM6 376 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 COQ6Q9Y2Z9 468 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 RIC1Q4ADV7 1423 aa6.83□□□□□ -1.32
TRIM38-201ENST00000357085 LRRIQ4A6NIV6 560 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 GOLGA8RI6L899 631 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 CYP11B2P19099 503 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 ERFP50548 548 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 ATN1P54259 1190 aaPredicted RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 MRPS15P82914 257 aaKnown RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 ACAP1Q15027 740 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 KHDC1Q4VXA5 237 aaKnown RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 OR52E8Q6IFG1 317 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 PLEKHO2Q8TD55 490 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 HAPLN3Q96S86 360 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 SUN2Q9UH99 717 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 NAALADL1Q9UQQ1 740 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 GPC6Q9Y625 555 aaPredicted RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 PROZP22891 400 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 CD97P48960 835 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 ASTE1Q2TB18 679 aaPredicted RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 RASGRP4Q8TDF6 673 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 GPR101Q96P66 508 aaPredicted RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 PAFAH2Q99487 392 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 BEGAINQ9BUH8 593 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 NACA2Q9H009 215 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 PIH1D3Q9NQM4 214 aaKnown RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 TRIM17Q9Y577 477 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 SLIT2O94813 1529 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 ARHGEF37A1IGU5 675 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 A6NJR5 290 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 GLRA3O75311 464 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 PABPC4Q13310 644 aaKnown RBP eCLIP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 RFX4Q33E94 735 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 RBM20Q5T481 1227 aaKnown RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 STXBP5Q5T5C0 1151 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 HGSNATQ68CP4 663 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 ERI1Q8IV48 349 aaKnown RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 FAM9CQ8IZT9 166 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 OR9Q1Q8NGQ5 310 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 RAB2BQ8WUD1 216 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 RTKNQ9BST9 563 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 TRIM62Q9BVG3 475 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 NEUROG2Q9H2A3 272 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 CCNB1IP1Q9NPC3 277 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 DCP1AQ9NPI6 582 aaPredicted RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 TMA7Q9Y2S6 64 aaKnown RBP6.82□□□□□ -1.32
TRIM38-201ENST00000357085 CCDC159P0C7I6 412 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 POLR2MP0CAP2 368 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 POLD2P49005 469 aa6.82□□□□□ -1.32
TRIM38-201ENST00000357085 KRT28Q7Z3Y7 464 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms