RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PAX7P23759 505 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 GPC1P35052 558 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 MCAMP43121 646 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 C10orf120Q5SQS8 335 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SHCBP1LQ9BZQ2 653 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 RNF112Q9ULX5 631 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SPATA2Q9UM82 520 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 H7C0S8 307 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 TARSP26639 723 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 MAPK7Q13164 816 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 B3GNT6Q6ZMB0 384 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 TMEM143Q96AN5 459 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 IRX2Q9BZI1 471 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 COPS7BQ9H9Q2 264 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 GYPCP04921 128 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 TMEM253P0C7T8 217 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 MAGEA4P43358 317 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 NPEPPSP55786 919 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 NCF4Q15080 339 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 RBM43Q6ZSC3 357 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 CENPLQ8N0S6 344 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 C19orf18Q8NEA5 215 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 C1orf50Q9BV19 199 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 ILF2Q12905 390 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 PIGHQ14442 188 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 COG2Q14746 738 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 TAB1Q15750 504 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 DPP10Q8N608 796 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 KCND2Q9NZV8 630 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 ADAM30Q9UKF2 790 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 PLAGL2Q9UPG8 496 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SNX8Q9Y5X2 465 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 S100A1P23297 94 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 PLCL1Q15111 1095 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 RAD9BQ6WBX8 426 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 LRRC8DQ7L1W4 858 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 LPCAT2Q7L5N7 544 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 SEPT1Q8WYJ6 367 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 TMEM47Q9BQJ4 181 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 TMEM117Q9H0C3 514 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 RSL24D1Q9UHA3 163 aaKnown RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 CRLS1Q9UJA2 301 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 PADI4Q9UM07 663 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 ARIH1Q9Y4X5 557 aaPredicted RBP11.91□□□□□ -0.5
SPTBN1-202ENST00000356805 CES2O00748 559 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 RARBP10826 455 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 SLC44A5Q8NCS7 719 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 CHP1Q99653 195 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 NFKBIZQ9BYH8 718 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 REXO4Q9GZR2 422 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 UBA2Q9UBT2 640 aaPredicted RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 TAGLN3Q9UI15 199 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 MED14O60244 1454 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 MED26O95402 600 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 POLBP06746 335 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 YWHAQP27348 245 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 TMPRSS6Q8IU80 811 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 SPATA18Q8TC71 538 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 ACTRT1Q8TDG2 376 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 CCDC126Q96EE4 140 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 OSBPL6Q9BZF3 934 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 PIPSLA2A3N6 862 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 PDZK1P1A8MUH7 402 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 TXNP10599 105 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 NCAM1P13591 858 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 NME5P56597 212 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 CDH18Q13634 790 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 ARHGAP15Q53QZ3 475 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 FUKQ8N0W3 1084 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 ZNF786Q8N393 782 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 STK32AQ8WU08 396 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 DDX20Q9UHI6 824 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 PEX1O43933 1283 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 KRT6AP02538 564 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 LRG1P02750 347 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 KRT6BP04259 564 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 KRT6CP48668 564 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 SERPINH1P50454 418 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 SNRPFP62306 86 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 RALGDSQ12967 914 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 DDX39BQ13838 428 aaKnown RBP11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 UGT3A1Q6NUS8 523 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 TAF2Q6P1X5 1199 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 NEK10Q6ZWH5 1172 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 CYB5R4Q7L1T6 521 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 PAK5Q9P286 719 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 UTYO14607 1347 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 CNTFP26441 200 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 DPYDQ12882 1025 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 IZUMO2Q6UXV1 221 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 SYNE4Q8N205 404 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 ATP9AO75110 1047 aa11.9□□□□□ -0.5
SPTBN1-202ENST00000356805 FXR1P51114 621 aaKnown RBP eCLIP11.9□□□□□ -0.52e-6■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms