RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 CREBRFQ8IUR6 639 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZSCAN18Q8TBC5 510 aaPredicted RBP13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MRPS31Q92665 395 aaKnown RBP13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SMOQ99835 787 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FUCA2Q9BTY2 467 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DUSP16Q9BY84 665 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 EPHX3Q9H6B9 360 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZFP14Q9HCL3 533 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC2A4RGQ9NR83 387 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FAM49BQ9NUQ9 324 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 APEX2Q9UBZ4 518 aa13.86□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TADA3O75528 432 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CAVIN2O95810 425 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 VDRP11473 427 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SRFP11831 508 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZNF18P17022 549 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NPR3P17342 541 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PON1P27169 355 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PDE6CP51160 858 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZNF132P52740 706 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MFAP3P55082 362 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ORC1Q13415 861 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 NCAPHQ15003 741 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 STILQ15468 1287 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZNF394Q53GI3 561 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PPP1R26Q5T8A7 1209 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SNX30Q5VWJ9 437 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TRIM67Q6ZTA4 783 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CLEC20AQ6ZU45 233 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ANKRD52Q8NB46 1076 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PDZD8Q8NEN9 1154 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZMIZ2Q8NF64 920 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DEPDC1BQ8WUY9 529 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZSWIM3Q96MP5 696 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KCNK16Q96T55 309 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FANCLQ9NW38 375 aa13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MAGED2Q9UNF1 606 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DOCK8Q8NF50 2099 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TPM2P07951 284 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GJA1P17302 382 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 RFX1P22670 979 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 YWHAQP27348 245 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC5A3P53794 718 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZNF268Q14587 947 aaPredicted RBP13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MEA1Q16626 185 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ANO6Q4KMQ2 910 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SGO2Q562F6 1265 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GPR158Q5T848 1215 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TMEM270Q6UE05 265 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 BMP8AQ7Z5Y6 402 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ARHGEF19Q8IW93 802 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CMTM8Q8IZV2 173 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ANKRD20A12PQ8NF67 263 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 RSAD2Q8WXG1 361 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KREMEN1Q96MU8 473 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLITRK1Q96PX8 696 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC46A2Q9BY10 475 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FBXO44Q9H4M3 255 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLITRK6Q9H5Y7 841 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KIF9Q9HAQ2 790 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TRPV5Q9NQA5 729 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TRPM5Q9NZQ8 1165 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 WNT16Q9UBV4 365 aa13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 LIMA1Q9UHB6 759 aaKnown RBP13.84□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SMTNL1A8MU46 457 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 HHLA1C9JL84 531 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 BEST1O76090 585 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC9A1P19634 815 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ADORA2BP29275 332 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 SLC8A3P57103 927 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 USP46P62068 366 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KRT31Q15323 416 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TANGO2Q6ICL3 276 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 RRAGAQ7L523 313 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ARID3BQ8IVW6 561 aaPredicted RBP13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MFSD6LQ8IWD5 586 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KIAA1958Q8N8K9 716 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ASIC4Q96FT7 647 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CRACR2AQ9BSW2 395 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 UBE2TQ9NPD8 197 aaPredicted RBP13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DAAM1Q9Y4D1 1078 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PCDHB4Q9Y5E5 795 aa13.83□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ZNF840PA6NDX5 716 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 PRR33A8MZF0 331 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 O00370 1275 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 ZDHHC11BP0C7U3 371 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 TCF3P15923 654 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 PSMC3P17980 439 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 AVPR1AP37288 418 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 TUBP50607 506 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 MAP3K7CLP57077 242 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 CYP4F8P98187 520 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 PFKPQ01813 784 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 FCHO2Q0JRZ9 810 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 CNGA2Q16280 664 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 HSP90AA4PQ58FG1 418 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 STXBP5Q5T5C0 1151 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 DPY19L2P1Q6NXN4 242 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 LCLAT1Q6UWP7 414 aa13.83□□□□□ -0.2
HLA-DQA1-201ENST00000343139 SHC3Q92529 594 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms