RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 TMEM150AQ86TG1 271 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 MON1AQ86VX9 555 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 STKLD1Q8NE28 680 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 JAKMIP2Q96AA8 810 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 PBXIP1Q96AQ6 731 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 TUBGCP2Q9BSJ2 902 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 TTLL2Q9BWV7 592 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 SLC46A2Q9BY10 475 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 NAT10Q9H0A0 1025 aaKnown RBP14.85□□□□□ -0.03
LIMS1-201ENST00000332345 INTS2Q9H0H0 1204 aaKnown RBP14.85□□□□□ -0.03
LIMS1-201ENST00000332345 SMOC2Q9H3U7 446 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 CSNK1G1Q9HCP0 422 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 SLC2A4RGQ9NR83 387 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 KRT82Q9NSB4 513 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 SAMSN1Q9NSI8 373 aaKnown RBP14.85□□□□□ -0.03
LIMS1-201ENST00000332345 WNT16Q9UBV4 365 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 NFE2L3Q9Y4A8 694 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 PCDHB4Q9Y5E5 795 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 TECTAO75443 2155 aa14.85□□□□□ -0.03
LIMS1-201ENST00000332345 FAM86C2PA6NEL3 165 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 KCNJ18B7U540 433 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 NARSO43776 548 aaKnown RBP14.84□□□□□ -0.03
LIMS1-201ENST00000332345 PSMC3P17980 439 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 FCARP24071 287 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 AVPR1AP37288 418 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 VIPR2P41587 438 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 MAP3K7CLP57077 242 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 SLC8A3P57103 927 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 GPC5P78333 572 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 PFKPQ01813 784 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 KCNJ12Q14500 433 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 EXOC3L4Q17RC7 722 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 KLHL40Q2TBA0 621 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 VWA3BQ502W6 1294 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 HSP90AA4PQ58FG1 418 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 TCP11X2Q5H9J9 407 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 STXBP5Q5T5C0 1151 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 PPP1R26Q5T8A7 1209 aaPredicted RBP14.84□□□□□ -0.03
LIMS1-201ENST00000332345 TXNDC8Q6A555 127 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 RRAGAQ7L523 313 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 ENOSF1Q7L5Y1 443 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 MFSD6LQ8IWD5 586 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 CMTM8Q8IZV2 173 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 MAB21L3Q8N8X9 362 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 DEPDC1BQ8WUY9 529 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 ASIC4Q96FT7 647 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 SLITRK1Q96PX8 696 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 SMOQ99835 787 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 CRACR2AQ9BSW2 395 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 LRFN3Q9BTN0 628 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 TRMT61BQ9BVS5 477 aaKnown RBP14.84□□□□□ -0.03
LIMS1-201ENST00000332345 DUSP16Q9BY84 665 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 PLA2G2FQ9BZM2 168 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 NDST4Q9H3R1 872 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 FBXO44Q9H4M3 255 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 C11orf16Q9NQ32 467 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 TMEM30AQ9NV96 361 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 OBP2AQ9NY56 170 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 GCNT4Q9P109 453 aa14.84□□□□□ -0.03
LIMS1-201ENST00000332345 HEPACAM2A8MVW5 462 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 PES1O00541 588 aaKnown RBP14.83□□□□□ -0.04
LIMS1-201ENST00000332345 TNFRSF10BO14763 440 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 TPM2P07951 284 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 CFHP08603 1231 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 PAEPP09466 180 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 VDRP11473 427 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 PFKLP17858 780 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 PDE6CP51160 858 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 MFAP3P55082 362 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 USP46P62068 366 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 TYRO3Q06418 890 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 TAF10Q12962 218 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 SKOR2Q2VWA4 1001 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-201ENST00000332345 SGO2Q562F6 1265 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 ARHGAP17Q68EM7 881 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 PHLDB3Q6NSJ2 640 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 TMEM270Q6UE05 265 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 YAF2Q8IY57 180 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 CELF5Q8N6W0 485 aaKnown RBP14.83□□□□□ -0.04
LIMS1-201ENST00000332345 PDZD8Q8NEN9 1154 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 OVCA2Q8WZ82 227 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 UBXN6Q9BZV1 441 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 PNPLA8Q9NP80 782 aa14.83□□□□□ -0.04
LIMS1-201ENST00000332345 UBE2TQ9NPD8 197 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-201ENST00000332345 ANAPC1Q9H1A4 1944 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 TRAV19A0A0A6YYK7 116 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 ZNF263O14978 683 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 BEST1O76090 585 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 ABL1P00519 1130 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 USP17L7P0C7H9 530 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 CD19P15391 556 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 NPR3P17342 541 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 SLC9A1P19634 815 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 SLC5A3P53794 718 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 MYL5Q02045 173 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 IFRD2Q12894 506 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-201ENST00000332345 TRIM65Q6PJ69 517 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 VITQ6UXI7 678 aa14.82□□□□□ -0.04
LIMS1-201ENST00000332345 CLEC20AQ6ZU45 233 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms