RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CHKAP35790 457 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 PIK3CAP42336 1068 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 EPS15P42566 896 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 BTDP43251 543 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 YWHAGP61981 247 aaKnown RBP eCLIP12.37□□□□□ -0.43
SHMT2-201ENST00000328923 TMEM119Q4V9L6 283 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 H2AFVQ71UI9 128 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 HEATR3Q7Z4Q2 680 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 ANKRD35Q8N283 1001 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 GSDMBQ8TAX9 411 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 DENND1AQ8TEH3 1009 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 OTUD5Q96G74 571 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 BTBD9Q96Q07 612 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 RANBP9Q96S59 729 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 RAB34Q9BZG1 259 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 AMFRQ9UKV5 643 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 PLA2G4CQ9UP65 541 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 SATB2Q9UPW6 733 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 PTPN22Q9Y2R2 807 aa12.37□□□□□ -0.43
SHMT2-201ENST00000328923 J3QRK9 145 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 NCANO14594 1321 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 TRPA1O75762 1119 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 CYP1A2P05177 515 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 FYNP06241 537 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 RPL26P61254 145 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 SLC1A5Q15758 541 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 LETM2Q2VYF4 491 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 MDH1BQ5I0G3 518 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 CLVS1Q8IUQ0 354 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 MMAAQ8IVH4 418 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 AHI1Q8N157 1196 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 OSCP1Q8WVF1 389 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 TAMM41Q96BW9 452 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 FBXL8Q96CD0 374 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 RTFDC1Q9BY42 306 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 UNKQ9C0B0 810 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 CDH19Q9H159 772 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 ZMYM2Q9UBW7 1377 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 ZSCAN5BA6NJL1 495 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 PSMD11O00231 422 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 DDX3YO15523 660 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 DENRO43583 198 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 PARNO95453 639 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 EIF2S1P05198 315 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 HSPA6P17066 643 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 RPA3P35244 121 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 DYNLL1P63167 89 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 CTTNQ14247 550 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 SUZ12Q15022 739 aaKnown RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 GRIK5Q16478 980 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 DPY19L2P1Q6NXN4 242 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 DYMQ7RTS9 669 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 BRSK1Q8TDC3 778 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 SLC26A7Q8TE54 656 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 GIMAP1Q8WWP7 306 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 ZNF75CPQ92670 426 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 CRNNQ9UBG3 495 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-201ENST00000328923 LGALS13Q9UHV8 139 aa12.36□□□□□ -0.43
SHMT2-201ENST00000328923 AP3B1O00203 1094 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 SIN3BO75182 1162 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 ENO1P06733 434 aaKnown RBP12.35□□□□□ -0.43
SHMT2-201ENST00000328923 HIBADHP31937 336 aaKnown RBP12.35□□□□□ -0.43
SHMT2-201ENST00000328923 COASYQ13057 564 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 FAM26FQ5R3K3 315 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 XKR5Q6UX68 686 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 TMPRSS6Q8IU80 811 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 PSPC1Q8WXF1 523 aaKnown RBP12.35□□□□□ -0.43
SHMT2-201ENST00000328923 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 RBM15Q96T37 977 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHMT2-201ENST00000328923 KLC2Q9H0B6 622 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 C6orf50Q9HD87 102 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 TFCP2L1Q9NZI6 479 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 EBF1Q9UH73 591 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 INPP5FQ9Y2H2 1132 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 IFT52Q9Y366 437 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 UGT1A9O60656 530 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 MYCP01106 439 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-201ENST00000328923 UGT1A6P19224 532 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 UGT1A1P22309 533 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 UGT1A4P22310 534 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 IFNA8P32881 189 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 UGT1A3P35503 534 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 UGT1A5P35504 534 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 GRAPQ13588 217 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
SHMT2-201ENST00000328923 GRAPLQ8TC17 118 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms