RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 ARHGEF38Q9NXL2 777 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 SUPT3HB4E1H0 165 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 FOXN3O00409 490 aaPredicted RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 SUPT3HO75486 399 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 COPS2P61201 443 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 WNT8AQ9H1J5 351 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 EPC1Q9H2F5 836 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 PARP4Q9UKK3 1724 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 PDZK1P1A8MUH7 402 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 DUSP11O75319 330 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 CRYBB1P53674 252 aaPredicted RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 DUSP28Q4G0W2 176 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 C15orf52Q6ZUT6 534 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 CROCCP2Q86T23 111 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 CABS1Q96KC9 395 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 UXTQ9UBK9 157 aaPredicted RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 SRRDQ9UH36 339 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 TMEM247A6NEH6 219 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 ACKR2O00590 384 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 COPEO14579 308 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 STX7O15400 261 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 CST8O60676 142 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 IL1BP01584 269 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 SLC2A3P11169 496 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 GLRA2P23416 452 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 GNGT1P63211 74 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 GPR158Q5T848 1215 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 IZUMO3Q5VZ72 239 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 FEZF2Q8TBJ5 459 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 OTULINQ96BN8 352 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 PIH1D1Q9NWS0 290 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 XPO7Q9UIA9 1087 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 CDC23Q9UJX2 597 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 PEAK1Q9H792 1746 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 ZNF185O15231 689 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 KCNA2P16389 499 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 AXLP30530 894 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 BTKQ06187 659 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 GPM6BQ13491 265 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 ATAT1Q5SQI0 421 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 TBC1D1Q86TI0 1168 aaPredicted RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 CENPKQ9BS16 269 aa9.38□□□□□ -0.91
CTC1-201ENST00000315684 LIMA1Q9UHB6 759 aaKnown RBP9.38□□□□□ -0.91
CTC1-201ENST00000315684 SCAMP1O15126 338 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TUBBP07437 444 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 GGCXP38435 758 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 MARSP56192 900 aaKnown RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 SERPINA13PQ6UXR4 307 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 FBXO44Q9H4M3 255 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 INTS9Q9NV88 658 aaKnown RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 SMARCAL1Q9NZC9 954 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 LMO7Q8WWI1 1683 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 NEDD8-MDP1E9PL57 170 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 MEIS2O14770 477 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 NOL3O60936 208 aaKnown RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 TMCC1O94876 653 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TBCCQ15814 346 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 ZNF284Q2VY69 593 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 SAMD3Q8N6K7 520 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 C18orf25Q96B23 403 aaPredicted RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 HVCN1Q96D96 273 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 SPDL1Q96EA4 605 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 MRIQ9BWK5 157 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 ATP13A1Q9HD20 1204 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 COL3A1P02461 1466 aaPredicted RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 TRIM16O95361 564 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 IL9RQ01113 521 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 APBA1Q02410 837 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TBC1D19Q8N5T2 526 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 DBF4BQ8NFT6 615 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 RFFLQ8WZ73 363 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 DMAP1Q9NPF5 467 aaPredicted RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 KLHL14Q9P2G3 628 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TBL1XO60907 577 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 GJB6O95452 261 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 CDC25BP30305 580 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TUBP50607 506 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 P3H1Q32P28 736 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 RCOR2Q8IZ40 523 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 PDZD8Q8NEN9 1154 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 LPCAT1Q8NF37 534 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 ZNF197O14709 1029 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 SMIM24O75264 130 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 ERVK-10P10266 1014 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TYK2P29597 1187 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 HOXA7P31268 230 aaPredicted RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 RABGGTBP53611 331 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 BST2Q10589 180 aaKnown RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 DDX39BQ13838 428 aaKnown RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 SIX5Q8N196 739 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 NPLOC4Q8TAT6 608 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TMC2Q8TDI7 906 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 TFB1MQ8WVM0 346 aaKnown RBP9.37□□□□□ -0.91
CTC1-201ENST00000315684 CDY1Q9Y6F8 540 aa9.37□□□□□ -0.91
CTC1-201ENST00000315684 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms