RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 DENND1BQ6P3S1 775 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 ACTL9Q8TC94 416 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 KREMEN1Q96MU8 473 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 NXF3Q9H4D5 531 aaKnown RBP14.27□□□□□ -0.12
DDX54-202ENST00000314045 DMAC2Q9NW81 257 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 MID2Q9UJV3 735 aa14.27□□□□□ -0.12
DDX54-202ENST00000314045 ARIH2O95376 493 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.13
DDX54-202ENST00000314045 PRAMEP78395 509 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 CRHR2Q13324 411 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 ZBTB41Q5SVQ8 909 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 UNC93AQ86WB7 457 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 OR2W6PQ8NHA6 318 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 CASKIN2Q8WXE0 1202 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 ADAM33Q9BZ11 813 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 PFDN4Q9NQP4 134 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 ZC3H7BQ9UGR2 993 aaKnown RBP14.27□□□□□ -0.13
DDX54-202ENST00000314045 AP4E1Q9UPM8 1137 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 E5RJQ4 531 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 SLC2A3P11169 496 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 PYGMP11217 842 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 NFKBIAP25963 317 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 ASPHQ12797 758 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 TSHZ1Q6ZSZ6 1077 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 C3orf20Q8ND61 904 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 RMDN1Q96DB5 314 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 ZBED3Q96IU2 234 aaPredicted RBP14.27□□□□□ -0.13
DDX54-202ENST00000314045 KCND1Q9NSA2 647 aa14.27□□□□□ -0.13
DDX54-202ENST00000314045 COL22A1Q8NFW1 1626 aaPredicted RBP14.26□□□□□ -0.13
DDX54-202ENST00000314045 MAGEA4P43358 317 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 HARS2P49590 506 aaKnown RBP14.26□□□□□ -0.13
DDX54-202ENST00000314045 BIRC2Q13490 618 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 ITGA7Q13683 1181 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 WDR93Q6P2C0 686 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 RAB44Q7Z6P3 723 aaPredicted RBP14.26□□□□□ -0.13
DDX54-202ENST00000314045 IFNL1Q8IU54 200 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 CD99L2Q8TCZ2 262 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 HNRNPLLQ8WVV9 542 aaKnown RBP14.26□□□□□ -0.13
DDX54-202ENST00000314045 RAPGEF5Q92565 580 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 LPPQ93052 612 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 HDAC11Q96DB2 347 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 B4GALT4O60513 344 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 CDH16O75309 829 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 GMNNO75496 209 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 PAPOLAP51003 745 aaKnown RBP14.26□□□□□ -0.13
DDX54-202ENST00000314045 DMTNQ08495 405 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 ANO4Q32M45 955 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 CHMP2BQ9UQN3 213 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 CNTNAP2Q9UHC6 1331 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 GPR25O00155 361 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 CYBBP04839 570 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 URODP06132 367 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 ASGR1P07306 291 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 SH2D3CQ8N5H7 860 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 GIMAP7Q8NHV1 300 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 EDEM1Q92611 657 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 TRPV6Q9H1D0 765 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 PCDHA3Q9Y5H8 950 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
DDX54-202ENST00000314045 MTSS1O43312 755 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 NOL4O94818 638 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 IRF1P10914 325 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 CCDC130P13994 396 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 PPARGP37231 505 aaPredicted RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 COPS2P61201 443 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 RAD51Q06609 339 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 FAXCQ5TGI0 409 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 MYLK4Q86YV6 388 aaPredicted RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 ATP6V1E2Q96A05 226 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 FAM105AQ9NUU6 356 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 GRK4P32298 578 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 TSTA3Q13630 321 aaPredicted RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 CCNG2Q16589 344 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 FAM47EQ6ZV65 393 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 TMEM139Q8IV31 216 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 FBXO25Q8TCJ0 367 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 KRT35Q92764 455 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 RPRD1AQ96P16 312 aaPredicted RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 PGLYRP2Q96PD5 576 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 PITPNM3Q9BZ71 974 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 REXO2Q9Y3B8 237 aaKnown RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 F8VP50 259 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 SEPT4O43236 478 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 PTPN1P18031 435 aaKnown RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 ARHGAP1Q07960 439 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 TMEM86AQ8N2M4 240 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 PPP2R3CQ969Q6 453 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 SLC45A1Q9Y2W3 748 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 CCDC88AQ3V6T2 1871 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 SMAPO00193 183 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 SH3BP5O60239 455 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 CST3P01034 146 aaPredicted RBP14.25□□□□□ -0.13
DDX54-202ENST00000314045 TMPRSS15P98073 1019 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 TERF2Q15554 542 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 CCL14Q16627 93 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 MFSD7Q6UXD7 560 aa14.25□□□□□ -0.13
DDX54-202ENST00000314045 CREG2Q8IUH2 290 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms