RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 CHURC1Q8WUH1 139 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 EME2A4GXA9 379 aaPredicted RBP12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 SCRN3Q0VDG4 424 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 CEP170P1Q96L14 293 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 DNAJC7Q99615 494 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 TNFAIP2Q03169 654 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 SVOPQ8N4V2 548 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 CUL7Q14999 1698 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 ING3Q9NXR8 418 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 BEST2Q8NFU1 509 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 TAMM41Q96BW9 452 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 EMSYQ7Z589 1322 aa12.16□□□□□ -0.46
SHROOM3-201ENST00000296043 PGK2P07205 417 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 GLI1P08151 1106 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 GALCP54803 685 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 SNX17Q15036 470 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 TYSND1Q2T9J0 566 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 ZSWIM2Q8NEG5 633 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 GTF2H1P32780 548 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 FOLH1Q04609 750 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 TPTE2Q6XPS3 522 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 METTL23Q86XA0 190 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 ZNF285Q96NJ3 590 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 RPF1Q9H9Y2 349 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 ADD3Q9UEY8 706 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 PRKAB2O43741 272 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 CTSWP56202 376 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 KNOP1Q1ED39 458 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 SH3KBP1Q96B97 665 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 TADA1Q96BN2 335 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 WDR12Q9GZL7 423 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 TMEM138Q9NPI0 162 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 STMND1H3BQB6 276 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 RTN3O95197 1032 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 FAM153BP0C7A2 387 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 SFNP31947 248 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 PKN2Q16513 984 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 MAPK6Q16659 721 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 Q3C1V9 767 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 FAM153CQ494X1 144 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 TTMPQ5BVD1 217 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 RIPOR1Q6ZS17 1223 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 MTG1Q9BT17 334 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 WDR37Q9Y2I8 494 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 COQ6Q9Y2Z9 468 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 VAMP7P51809 220 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 CHRNDQ07001 517 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 SLFN12LQ6IEE8 588 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 DHFR2Q86XF0 187 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 DGKHQ86XP1 1220 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 SRBD1Q8N5C6 995 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 CYB5RLQ6IPT4 315 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 EIF3MQ7L2H7 374 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 SPATA16Q9BXB7 569 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 PLEKHA5Q9HAU0 1116 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 ERAP1Q9NZ08 941 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 PFDN2Q9UHV9 154 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 PKP3Q9Y446 797 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 ATXN2Q99700 1313 aaKnown RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 CAMKK1Q8N5S9 505 aa12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 FAM193BQ96PV7 902 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-201ENST00000296043 IFNAR1P17181 557 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 PGS1Q32NB8 556 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 PARP10Q53GL7 1025 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 TMPRSS6Q8IU80 811 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 ZC3H10Q96K80 434 aaKnown RBP12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 CMTM6Q9NX76 183 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 PHKA1P46020 1223 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 BTN3A2P78410 334 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 ACAP2Q15057 778 aa12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 ATXN2LQ8WWM7 1075 aaKnown RBP12.15□□□□□ -0.47
SHROOM3-201ENST00000296043 MYOM2P54296 1465 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 FAM25EA8MYX2 175 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 TOP3BO95985 862 aaKnown RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 LBPP18428 481 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 FASP25445 335 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 CLCN2P51788 898 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ASPRV1Q53RT3 343 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 MFSD14BQ5SR56 506 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 SPATA18Q8TC71 538 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 DMTF1Q9Y222 760 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 PLEKHG1Q9ULL1 1385 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 KIF20BQ96Q89 1820 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 KCTD2Q14681 263 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 PLA2G4EQ3MJ16 856 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ATP13A5Q4VNC0 1218 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 SLC27A3Q5K4L6 730 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 BROXQ5VW32 411 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 K7ERI5 159 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 MAPK7Q13164 816 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 ALCAMQ13740 583 aa12.14□□□□□ -0.47
SHROOM3-201ENST00000296043 SLC25A24Q6NUK1 477 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms