RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 TARSP26639 723 aaKnown RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 AVPR1AP37288 418 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 PRCPP42785 496 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 KPNA1P52294 538 aaPredicted RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 CACNA2D1P54289 1103 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 TMEM150AQ86TG1 271 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 SLC9A9Q8IVB4 645 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 GUF1Q8N442 669 aaKnown RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 B3GALNT2Q8NCR0 500 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 DEPDC1BQ8WUY9 529 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 MRPS31Q92665 395 aaKnown RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 SHDQ96IW2 340 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 TSG101Q99816 390 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 SLC46A2Q9BY10 475 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 TASP1Q9H6P5 420 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 ABCB6Q9NP58 842 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 FAM49BQ9NUQ9 324 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 SPATA6Q9NWH7 488 aaPredicted RBP10.42□□□□□ -0.74
CCDC58-201ENST00000291458 RMND1Q9NWS8 449 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 HSFX1Q9UBD0 423 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 CCL26Q9Y258 94 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 PCDHA5Q9Y5H7 936 aa10.42□□□□□ -0.74
CCDC58-201ENST00000291458 C2orf78A6NCI8 922 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 NOL4O94818 638 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 CKMP06732 381 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 EPB41P11171 864 aaKnown RBP10.41□□□□□ -0.74
CCDC58-201ENST00000291458 PTPN1P18031 435 aaKnown RBP10.41□□□□□ -0.74
CCDC58-201ENST00000291458 CCNE1P24864 410 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 ADORA2BP29275 332 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 ATICP31939 592 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 PMS1P54277 932 aaKnown RBP10.41□□□□□ -0.74
CCDC58-201ENST00000291458 STARD6P59095 220 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 USP46P62068 366 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 NOP14P78316 857 aaKnown RBP10.41□□□□□ -0.74
CCDC58-201ENST00000291458 PRKCQQ04759 706 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 TNK2Q07912 1038 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 PPP3CAQ08209 521 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 ADAM9Q13443 819 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 C1orf220Q5T0J3 134 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 TRIM68Q6AZZ1 485 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 PHLDB3Q6NSJ2 640 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 FAM171BQ6P995 826 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 ZNF852Q6ZMS4 543 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 SV2AQ7L0J3 742 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 LIMS2Q7Z4I7 341 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 FRMD5Q7Z6J6 570 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 ACOT1Q86TX2 421 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 FAM35AQ86V20 835 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 MFSD6LQ8IWD5 586 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 CMTM8Q8IZV2 173 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 ENGASEQ8NFI3 743 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 MYCBPAPQ8TBZ2 947 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 SPATA18Q8TC71 538 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 TAS1R2Q8TE23 839 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 DNASE1L2Q92874 299 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 IRF7Q92985 503 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 LRRC3BQ96PB8 259 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 B3GNT5Q9BYG0 378 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 BCO2Q9BYV7 579 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 IMPG2Q9BZV3 1241 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 GPR88Q9GZN0 384 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 TMEM30AQ9NV96 361 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 GTSE1Q9NYZ3 720 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 CTNND2Q9UQB3 1225 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 TRAF3IP3Q9Y228 551 aa10.41□□□□□ -0.74
CCDC58-201ENST00000291458 ATP8B3O60423 1300 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 TACC1O75410 805 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 F11P03951 625 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 P4HA1P13674 534 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 RPL13P26373 211 aaKnown RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 PSMC2P35998 433 aaKnown RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 NDST1P52848 882 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 AP3M2P53677 418 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 MAPRE1Q15691 268 aaKnown RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 ZACNQ401N2 412 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 CFAP221Q4G0U5 840 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 ZCWPW2Q504Y3 356 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 ZNF658Q5TYW1 1059 aaPredicted RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 INTS8Q75QN2 995 aaKnown RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 ARL14EPQ8N8R7 260 aaPredicted RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 RIN3Q8TB24 985 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 BPIFB1Q8TDL5 484 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 USP13Q92995 863 aaPredicted RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 FUBP3Q96I24 572 aaKnown RBP eCLIP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 SLC22A12Q96S37 553 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 CYP2S1Q96SQ9 504 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 TRPV4Q9HBA0 871 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 APOBEC3GQ9HC16 384 aaKnown RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 RBM12Q9NTZ6 932 aaKnown RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 UXTQ9UBK9 157 aaPredicted RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 HOOK1Q9UJC3 728 aaKnown RBP10.4□□□□□ -0.74
CCDC58-201ENST00000291458 MAN1B1Q9UKM7 699 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 PCDHB3Q9Y5E6 796 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 R4GN57 208 aa10.4□□□□□ -0.74
CCDC58-201ENST00000291458 ATG2BQ96BY7 2078 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 TRAV19A0A0A6YYK7 116 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 CETN3O15182 167 aa10.39□□□□□ -0.75
CCDC58-201ENST00000291458 AP1G2O75843 785 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms