RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 CMTM8Q8IZV2 173 aa26.66■■□□□ 1.86
PDF-201ENST00000288022 NUP93Q8N1F7 819 aa26.66■■□□□ 1.86
PDF-201ENST00000288022 DEPDC1BQ8WUY9 529 aa26.66■■□□□ 1.86
PDF-201ENST00000288022 TMEM176AQ96HP8 235 aa26.66■■□□□ 1.86
PDF-201ENST00000288022 SMG9Q9H0W8 520 aaKnown RBP26.66■■□□□ 1.86
PDF-201ENST00000288022 THAP9Q9H5L6 903 aa26.66■■□□□ 1.86
PDF-201ENST00000288022 FAM124BQ9H5Z6 455 aaPredicted RBP26.66■■□□□ 1.86
PDF-201ENST00000288022 GREB1Q4ZG55 1949 aa26.66■■□□□ 1.86
PDF-201ENST00000288022 NUP210Q8TEM1 1887 aaPredicted RBP26.66■■□□□ 1.86
PDF-201ENST00000288022 MAP3K7CLP57077 242 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 CT47A1Q5JQC4 288 aaPredicted RBP26.65■■□□□ 1.86
PDF-201ENST00000288022 MON1AQ86VX9 555 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 IRF2BP1Q8IU81 584 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 PPM1KQ8N3J5 372 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 EHBP1Q8NDI1 1231 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 FLCNQ8NFG4 579 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 RSPRY1Q96DX4 576 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 HNRNPABQ99729 332 aaKnown RBP26.65■■□□□ 1.86
PDF-201ENST00000288022 SMOQ99835 787 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 TTLL2Q9BWV7 592 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 BRD9Q9H8M2 597 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 ARHGEF3Q9NR81 526 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 TRPM5Q9NZQ8 1165 aa26.65■■□□□ 1.86
PDF-201ENST00000288022 STK25O00506 426 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 RTN3O95197 1032 aaPredicted RBP26.64■■□□□ 1.86
PDF-201ENST00000288022 PRAMEF12O95522 483 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 GDI1P31150 447 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 RAD23BP54727 409 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 HSP90AA4PQ58FG1 418 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 MFSD6LQ8IWD5 586 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 SLC4A11Q8NBS3 891 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 LMO3Q8TAP4 145 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 JAKMIP2Q96AA8 810 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 SLITRK1Q96PX8 696 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 DENND4CQ5VZ89 1909 aa26.64■■□□□ 1.86
PDF-201ENST00000288022 NCANO14594 1321 aa26.64■■□□□ 1.85
PDF-201ENST00000288022 KRBA1A5PL33 1030 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 SOBPA7XYQ1 873 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 BEST1O76090 585 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 ABL1P00519 1130 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 YWHAQP27348 245 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 WEE1P30291 646 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 SLC5A3P53794 718 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 TAF10Q12962 218 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 PPP1R26Q5T8A7 1209 aaPredicted RBP26.63■■□□□ 1.85
PDF-201ENST00000288022 INTS2Q9H0H0 1204 aaKnown RBP26.63■■□□□ 1.85
PDF-201ENST00000288022 GCNT4Q9P109 453 aa26.63■■□□□ 1.85
PDF-201ENST00000288022 TRAV19A0A0A6YYK7 116 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 ZNF263O14978 683 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 COL9A1P20849 921 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 RRAGAQ7L523 313 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 CELF5Q8N6W0 485 aaKnown RBP26.62■■□□□ 1.85
PDF-201ENST00000288022 ZMIZ2Q8NF64 920 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 IRF7Q92985 503 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 FBXO32Q969P5 355 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 CSNK1G1Q9HCP0 422 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 OBP2AQ9NY56 170 aa26.62■■□□□ 1.85
PDF-201ENST00000288022 MYH10P35580 1976 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 C2orf78A6NCI8 922 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 CKMP06732 381 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 PPP3CCP48454 512 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 SLC44A4Q53GD3 710 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 CLEC20AQ6ZU45 233 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 ARHGEF19Q8IW93 802 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 SCAMP5Q8TAC9 235 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 BPIFB1Q8TDL5 484 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 CYP2S1Q96SQ9 504 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 CRACR2AQ9BSW2 395 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 TDP1Q9NUW8 608 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 ANO10Q9NW15 660 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 HCN4Q9Y3Q4 1203 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 PCDHB4Q9Y5E5 795 aa26.61■■□□□ 1.85
PDF-201ENST00000288022 TRIOO75962 3097 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 TNFRSF10BO14763 440 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 USP17L7P0C7H9 530 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 CD19P15391 556 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 MLF2Q15773 248 aaPredicted RBP26.6■■□□□ 1.85
PDF-201ENST00000288022 STX1AQ16623 288 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 MAN2A1Q16706 1144 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 IER5LQ5T953 404 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 TMEM270Q6UE05 265 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 ARL14EPQ8N8R7 260 aaPredicted RBP26.6■■□□□ 1.85
PDF-201ENST00000288022 TTC16Q8NEE8 873 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 DNASE1L2Q92874 299 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 KAT5Q92993 513 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 USP13Q92995 863 aaPredicted RBP26.6■■□□□ 1.85
PDF-201ENST00000288022 SHDQ96IW2 340 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 TBC1D17Q9HA65 648 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 TMEM63CQ9P1W3 806 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 CCL26Q9Y258 94 aa26.6■■□□□ 1.85
PDF-201ENST00000288022 ZNF840PA6NDX5 716 aa26.59■■□□□ 1.85
PDF-201ENST00000288022 PRKCSHP14314 528 aaPredicted RBP26.59■■□□□ 1.85
PDF-201ENST00000288022 NPR3P17342 541 aa26.59■■□□□ 1.85
PDF-201ENST00000288022 PDE6CP51160 858 aa26.59■■□□□ 1.85
PDF-201ENST00000288022 VCPP55072 806 aaKnown RBP26.59■■□□□ 1.85
PDF-201ENST00000288022 SGO2Q562F6 1265 aa26.59■■□□□ 1.85
PDF-201ENST00000288022 ASTLQ6HA08 431 aaPredicted RBP26.59■■□□□ 1.85
PDF-201ENST00000288022 GBP6Q6ZN66 633 aa26.59■■□□□ 1.85
PDF-201ENST00000288022 UBR7Q8N806 425 aa26.59■■□□□ 1.85
PDF-201ENST00000288022 PDZD8Q8NEN9 1154 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms