RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SPATA32Q96LK8 384 aa13.79□□□□□ -0.2
APOBEC3A-201ENST00000249116 SNX25Q9H3E2 840 aa13.79□□□□□ -0.2
APOBEC3A-201ENST00000249116 MAGEF1Q9HAY2 307 aa13.79□□□□□ -0.2
APOBEC3A-201ENST00000249116 CRTAC1Q9NQ79 661 aa13.79□□□□□ -0.2
APOBEC3A-201ENST00000249116 TRPM5Q9NZQ8 1165 aa13.79□□□□□ -0.2
APOBEC3A-201ENST00000249116 WNT6Q9Y6F9 365 aa13.79□□□□□ -0.2
APOBEC3A-201ENST00000249116 KIF26AQ9ULI4 1882 aaPredicted RBP13.79□□□□□ -0.2
APOBEC3A-201ENST00000249116 UBE4BO95155 1302 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 GPR179Q6PRD1 2367 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 C2orf78A6NCI8 922 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 TRIM66O15016 1216 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 AKAP3O75969 853 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 PDGFRBP09619 1106 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 FAM163BP0C2L3 166 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 GNL1P36915 607 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 PXNP49023 591 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 EPM2AIP1Q7L775 607 aaPredicted RBP13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 HS2ST1Q7LGA3 356 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 XXYLT1Q8NBI6 393 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 MYCBPAPQ8TBZ2 947 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 ACDQ96AP0 544 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 SLC22A12Q96S37 553 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 AGPAT3Q9NRZ7 376 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 GCNT4Q9P109 453 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 ARHGAP26Q9UNA1 814 aa13.78□□□□□ -0.2
APOBEC3A-201ENST00000249116 AXIN1O15169 862 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 CLIC2O15247 247 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 TGFB1I1O43294 461 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 TACC1O75410 805 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 NFATC1O95644 943 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 HOXC13P31276 330 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 HOXD13P35453 343 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 PPP3CCP48454 512 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 CYP2J2P51589 502 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 TNNC1P63316 161 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 CYP24A1Q07973 514 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 PSMD2Q13200 908 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 TRPC3Q13507 836 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 PSMD6Q15008 389 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 EML3Q32P44 896 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 WDR72Q3MJ13 1102 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 NELFCDQ8IXH7 590 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 C12orf50Q8NA57 414 aaPredicted RBP13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 OR6B3Q8NGW1 331 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 CCDC127Q96BQ5 260 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 PCED1BQ96HM7 432 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 SCAND2PQ9GZW5 306 aaPredicted RBP13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 FBRSL1Q9HCM7 1045 aaKnown RBP13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 FAM13BQ9NYF5 915 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 CGNQ9P2M7 1197 aaKnown RBP13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 CACNA1AO00555 2505 aa13.77□□□□□ -0.21
APOBEC3A-201ENST00000249116 DCHS1Q96JQ0 3298 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 EPN2O95208 641 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 CST3P01034 146 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 MDH1BQ5I0G3 518 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 RESP18Q5W5W9 173 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 SYT13Q7L8C5 426 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 DDX1Q92499 740 aaKnown RBP13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 C8orf48Q96LL4 319 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 HHIPQ96QV1 700 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 MRPL45Q9BRJ2 306 aaKnown RBP13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 TTLL2Q9BWV7 592 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 ARRDC1-AS1Q9H2J1 176 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 METRNQ9UJH8 293 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 DENND4CQ5VZ89 1909 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 OBSL1O75147 1896 aa13.76□□□□□ -0.21
APOBEC3A-201ENST00000249116 PVALEFA0A1B0GWK0 134 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 F8VP50 259 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 PHACTR2O75167 634 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 ZNF806P0C7X5 589 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 ATICP31939 592 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 USP46P62068 366 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 NOP14P78316 857 aaKnown RBP13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 DMC1Q14565 340 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 IL31Q6EBC2 164 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 KBTBD6Q86V97 674 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 KIAA1958Q8N8K9 716 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 SYAP1Q96A49 352 aaPredicted RBP13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 SLITRK1Q96PX8 696 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 ELOVL4Q9GZR5 314 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 LINC00597Q9H2U6 94 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 GDPD2Q9HCC8 539 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 CHMP5Q9NZZ3 219 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 PCDHGA5Q9Y5G8 931 aa13.75□□□□□ -0.21
APOBEC3A-201ENST00000249116 A8MXQ7 604 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 LEFTY2O00292 366 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 SLC9A3R1O14745 358 aaPredicted RBP13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 GDF9O60383 454 aa13.74□□□□□ -0.21
APOBEC3A-201ENST00000249116 EXOC3O60645 756 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms