RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 DNASE1L2Q92874 299 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 IRF7Q92985 503 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 TMEM176AQ96HP8 235 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 KRT82Q9NSB4 513 aa25.82■■□□□ 1.72
SDF2L1-201ENST00000248958 TADA3O75528 432 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 FAM200BP0CF97 657 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 CCDC130P13994 396 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 PRKCSHP14314 528 aaPredicted RBP25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 VIPR2P41587 438 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 CCDC183Q5T5S1 534 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 SASS6Q6UVJ0 657 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 YAF2Q8IY57 180 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 SIX5Q8N196 739 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 MAB21L3Q8N8X9 362 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 LMO3Q8TAP4 145 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 OVCA2Q8WZ82 227 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 SHDQ96IW2 340 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 HEXIM2Q96MH2 286 aaKnown RBP25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 SLITRK1Q96PX8 696 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 KCNK16Q96T55 309 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 KIF9Q9HAQ2 790 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 TRPV5Q9NQA5 729 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 FAM49BQ9NUQ9 324 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 TRPM5Q9NZQ8 1165 aa25.81■■□□□ 1.72
SDF2L1-201ENST00000248958 LRMPQ12912 555 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 ZNF394Q53GI3 561 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 TXNDC8Q6A555 127 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 CELF5Q8N6W0 485 aaKnown RBP25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 PDZD8Q8NEN9 1154 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 ARID3AQ99856 593 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 BRD9Q9H8M2 597 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 PNPLA8Q9NP80 782 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 ARHGEF3Q9NR81 526 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 TMEM30AQ9NV96 361 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 CA14Q9ULX7 337 aa25.8■■□□□ 1.72
SDF2L1-201ENST00000248958 TRAV19A0A0A6YYK7 116 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 YWHAQP27348 245 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 ADORA2BP29275 332 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 MTIF2P46199 727 aaKnown RBP25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 RAD23BP54727 409 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 USP46P62068 366 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 PRKCQQ04759 706 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 FCHO2Q0JRZ9 810 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 GRM2Q14416 872 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 ZNF268Q14587 947 aaPredicted RBP25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 IRF2BP1Q8IU81 584 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 SLC4A11Q8NBS3 891 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 SMOQ99835 787 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 HCN4Q9Y3Q4 1203 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 PATJQ8NI35 1801 aa25.79■■□□□ 1.72
SDF2L1-201ENST00000248958 ZNF263O14978 683 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 CHADO15335 359 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 USP17L7P0C7H9 530 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 GDI1P31150 447 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 PLA2G5P39877 138 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 CLCN5P51795 746 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 MAP3K7CLP57077 242 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 GCNT1Q02742 428 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 ARHGAP29Q52LW3 1261 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 PHLDB3Q6NSJ2 640 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 PPM1KQ8N3J5 372 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 ZMIZ2Q8NF64 920 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 BPIFB1Q8TDL5 484 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 FAM81BQ96LP2 452 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 FBXO44Q9H4M3 255 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 TDP1Q9NUW8 608 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 ANO10Q9NW15 660 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 IL37Q9NZH6 218 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 KIAA1257Q9ULG3 409 aa25.78■■□□□ 1.72
SDF2L1-201ENST00000248958 GTPBP10A4D1E9 387 aaKnown RBP25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 KRBA1A5PL33 1030 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 TNFRSF10BO14763 440 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 PDGFBP01127 241 aaPredicted RBP25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 RFX1P22670 979 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 SLC5A3P53794 718 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 STARD6P59095 220 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 TAF10Q12962 218 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 SLC44A4Q53GD3 710 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 PPP1R26Q5T8A7 1209 aaPredicted RBP25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 ARHGAP17Q68EM7 881 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 CLEC20AQ6ZU45 233 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 UBR7Q8N806 425 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 ENOX1Q8TC92 643 aaKnown RBP25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 KCNH6Q9H252 994 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 THG1LQ9NWX6 298 aaKnown RBP25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 NCANO14594 1321 aa25.77■■□□□ 1.72
SDF2L1-201ENST00000248958 ZNF840PA6NDX5 716 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 NPR3P17342 541 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 NUBP1P53384 320 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 PLCB2Q00722 1185 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 MLF2Q15773 248 aaPredicted RBP25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 MAN2A1Q16706 1144 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 ASTLQ6HA08 431 aaPredicted RBP25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 FLCNQ8NFG4 579 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 FBXO32Q969P5 355 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 JAKMIP2Q96AA8 810 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 RSPRY1Q96DX4 576 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 DUSP16Q9BY84 665 aa25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 INTS2Q9H0H0 1204 aaKnown RBP25.76■■□□□ 1.71
SDF2L1-201ENST00000248958 TRPC7Q9HCX4 862 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms