RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 ZNF398Q8TD17 642 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 PI4K2AQ9BTU6 479 aa19.08■□□□□ 0.65
PTPN12-201ENST00000248594 MYH11P35749 1972 aa19.08■□□□□ 0.64
PTPN12-201ENST00000248594 SEC24DO94855 1032 aaPredicted RBP19.08■□□□□ 0.64
PTPN12-201ENST00000248594 FGFR3P22607 806 aa19.08■□□□□ 0.64
PTPN12-201ENST00000248594 CCNIQ14094 377 aa19.08■□□□□ 0.64
PTPN12-201ENST00000248594 ANKS1BQ7Z6G8 1248 aa19.08■□□□□ 0.64
PTPN12-201ENST00000248594 CLVS1Q8IUQ0 354 aaPredicted RBP19.08■□□□□ 0.64
PTPN12-201ENST00000248594 NUP93Q8N1F7 819 aa19.08■□□□□ 0.64
PTPN12-201ENST00000248594 ZNF512Q96ME7 567 aaPredicted RBP19.08■□□□□ 0.64
PTPN12-201ENST00000248594 HBS1LQ9Y450 684 aaKnown RBP19.08■□□□□ 0.64
PTPN12-201ENST00000248594 CRTAMO95727 393 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 GPX6P59796 221 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 DIS3LQ8TF46 1054 aaKnown RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 THAP11Q96EK4 314 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 TIMMDC1Q9NPL8 285 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 J3QRK9 145 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 ZC3H11AO75152 810 aaKnown RBP eCLIP19.07■□□□□ 0.644e-6■■□□□ 12.1
PTPN12-201ENST00000248594 PHBP35232 272 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 MSS51Q4VC12 460 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 ANKRD22Q5VYY1 191 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 XKR5Q6UX68 686 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 C12orf50Q8NA57 414 aaPredicted RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 E2F7Q96AV8 911 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 FBXL8Q96CD0 374 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 NACA2Q9H009 215 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 VPS11Q9H270 941 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 FAIMQ9NVQ4 179 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 DDX39AO00148 427 aaKnown RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 DNALI1O14645 258 aaPredicted RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 AIM2O14862 343 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 SLC16A3O15427 465 aaKnown RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 PORP16435 677 aaPredicted RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 OTUD4Q01804 1114 aaKnown RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 RELAQ04206 551 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 CDHR3Q6ZTQ4 885 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 DQX1Q8TE96 717 aaKnown RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 SYT11Q9BT88 431 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 SEMA6AQ9H2E6 1030 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 AGPAT3Q9NRZ7 376 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 ZNF219Q9P2Y4 722 aaPredicted RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 COQ6Q9Y2Z9 468 aa19.07■□□□□ 0.64
PTPN12-201ENST00000248594 PARP4Q9UKK3 1724 aaKnown RBP19.07■□□□□ 0.64
PTPN12-201ENST00000248594 TRIM49D1C9J1S8 452 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 FMO1Q01740 532 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 KCPQ6ZWJ8 1503 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 KRT1P04264 644 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 DEPTORQ8TB45 409 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 USP13Q92995 863 aaPredicted RBP19.06■□□□□ 0.64
PTPN12-201ENST00000248594 TSPAN18Q96SJ8 248 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 POLR3CQ9BUI4 534 aaPredicted RBP19.06■□□□□ 0.64
PTPN12-201ENST00000248594 RSL24D1Q9UHA3 163 aaKnown RBP19.06■□□□□ 0.64
PTPN12-201ENST00000248594 GTF3C4Q9UKN8 822 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 GNEQ9Y223 722 aaKnown RBP19.06■□□□□ 0.64
PTPN12-201ENST00000248594 FAM58BPP0C7Q3 252 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 FDX1P10109 184 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 HOXA13P31271 388 aaPredicted RBP19.06■□□□□ 0.64
PTPN12-201ENST00000248594 ZNF362Q5T0B9 420 aaPredicted RBP19.06■□□□□ 0.64
PTPN12-201ENST00000248594 VWA5B1Q5TIE3 1220 aa19.06■□□□□ 0.64
PTPN12-201ENST00000248594 MXI1P50539 228 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 MRPS9P82933 396 aaKnown RBP19.05■□□□□ 0.64
PTPN12-201ENST00000248594 MYBPC1Q00872 1141 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 PRKD1Q15139 912 aaPredicted RBP19.05■□□□□ 0.64
PTPN12-201ENST00000248594 NKX1-1Q15270 411 aaPredicted RBP19.05■□□□□ 0.64
PTPN12-201ENST00000248594 FNBP1LQ5T0N5 605 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 KRT80Q6KB66 452 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 ADGRF4Q8IZF3 695 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 HEPHQ9BQS7 1158 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 SENP6Q9GZR1 1112 aaPredicted RBP19.05■□□□□ 0.64
PTPN12-201ENST00000248594 TJP1Q07157 1748 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 SIPA1L3O60292 1781 aaPredicted RBP19.05■□□□□ 0.64
PTPN12-201ENST00000248594 DNAJA2O60884 412 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 TNFAIP8O95379 198 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 COPAP53621 1224 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 SLC2A7Q6PXP3 512 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 BANPQ8N9N5 519 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 TBC1D23Q9NUY8 699 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 POMPQ9Y244 141 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 TCF4P15884 667 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 SCNN1DP51172 638 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 PKNOX1P55347 436 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 TCP10Q12799 353 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 SYDE1Q6ZW31 735 aaPredicted RBP19.05■□□□□ 0.64
PTPN12-201ENST00000248594 MIER3Q7Z3K6 550 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 GABPB2Q8TAK5 448 aaPredicted RBP19.05■□□□□ 0.64
PTPN12-201ENST00000248594 CBWD1Q9BRT8 395 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 MAN1C1Q9NR34 630 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 RABGEF1Q9UJ41 708 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 PLA2G4CQ9UP65 541 aa19.05■□□□□ 0.64
PTPN12-201ENST00000248594 K7ENM7 598 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 OXSR1O95747 527 aaPredicted RBP19.04■□□□□ 0.64
PTPN12-201ENST00000248594 CYP11B1P15538 503 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 ZSCAN18Q8TBC5 510 aaPredicted RBP19.04■□□□□ 0.64
PTPN12-201ENST00000248594 TOPORSQ9NS56 1045 aaPredicted RBP19.04■□□□□ 0.64
PTPN12-201ENST00000248594 GTPBP10A4D1E9 387 aaKnown RBP19.04■□□□□ 0.64
PTPN12-201ENST00000248594 CSPG5O95196 566 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 ZNF410Q86VK4 478 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 TTC13Q8NBP0 860 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 WRNIP1Q96S55 665 aa19.04■□□□□ 0.64
PTPN12-201ENST00000248594 PARVGQ9HBI0 331 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms