RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CLDND1Q9NY35 253 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 PCDHA9Q9Y5H5 950 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 PCDHAC2Q9Y5I4 1007 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 TNPO3Q9Y5L0 923 aaKnown RBP8.47□□□□□ -1.05
CXCR4-201ENST00000241393 PSME4Q14997 1843 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 RGPD3A6NKT7 1758 aaPredicted RBP8.47□□□□□ -1.05
CXCR4-201ENST00000241393 RGPD4Q7Z3J3 1758 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 SLX4Q8IY92 1834 aa8.47□□□□□ -1.05
CXCR4-201ENST00000241393 LOXHD1Q8IVV2 1947 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 AGPSO00116 658 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 ARVCFO00192 962 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 TGFB1I1O43294 461 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 BUB1O43683 1085 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 USP2O75604 605 aaPredicted RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 SLITRK3O94933 977 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 MED26O95402 600 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 SOD2P04179 222 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 CCDC172P0C7W6 258 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 POU3F2P20265 443 aaPredicted RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 GRK2P25098 689 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 GRK3P35626 688 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 STAT1P42224 750 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 PPFIA1Q13136 1202 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 ALCAMQ13740 583 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 RPS6KA1Q15418 735 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 CEP55Q53EZ4 464 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 ZNF772Q68DY9 489 aaPredicted RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 ALKBH5Q6P6C2 394 aaKnown RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 B3GNT9Q6UX72 402 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 NIPA1Q7RTP0 329 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 ZNF571Q7Z3V5 609 aaPredicted RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 SYCE1Q8N0S2 351 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 SAMD3Q8N6K7 520 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 C1orf131Q8NDD1 294 aaKnown RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 TMEM52Q8NDY8 209 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 FBXW5Q969U6 566 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 ASIC4Q96FT7 647 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 PRMT6Q96LA8 375 aaPredicted RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 JMJD8Q96S16 334 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 RIT2Q99578 217 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 TSPYL1Q9H0U9 437 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 VCPKMTQ9H867 229 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 RBM12Q9NTZ6 932 aaKnown RBP8.46□□□□□ -1.05
CXCR4-201ENST00000241393 DMAC2Q9NW81 257 aa8.46□□□□□ -1.05
CXCR4-201ENST00000241393 RSPH10B2B2RC85 870 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 TULP2O00295 520 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 NCK2O43639 380 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 GAS7O60861 476 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 SHOX2O60902 331 aaPredicted RBP8.46□□□□□ -1.06
CXCR4-201ENST00000241393 H2AFZP0C0S5 128 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 RSPH10BP0C881 870 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 SLC9A1P19634 815 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 HOXA13P31271 388 aaPredicted RBP8.46□□□□□ -1.06
CXCR4-201ENST00000241393 CXCR5P32302 372 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 BCL6P41182 706 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 SNAP25P60880 206 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 JAG1P78504 1218 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 GHRHRQ02643 423 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 CYP4A11Q02928 519 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 RRP1BQ14684 758 aaKnown RBP8.46□□□□□ -1.06
CXCR4-201ENST00000241393 HSF5Q4G112 596 aaPredicted RBP8.46□□□□□ -1.06
CXCR4-201ENST00000241393 DCAF17Q5H9S7 520 aaPredicted RBP8.46□□□□□ -1.06
CXCR4-201ENST00000241393 MROH9Q5TGP6 573 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 H2AFVQ71UI9 128 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 SLFN11Q7Z7L1 901 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 FAM186BQ8IYM0 893 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 LRRC57Q8N9N7 239 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 FAM76AQ8TAV0 307 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 CYP2W1Q8TAV3 490 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 ACTRT1Q8TDG2 376 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 HDAC7Q8WUI4 952 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 STK33Q9BYT3 514 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 VPS33BQ9H267 617 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 PDLIM7Q9NR12 457 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 RGL1Q9NZL6 768 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 GCNT4Q9P109 453 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 MCM8Q9UJA3 840 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 FEM1BQ9UK73 627 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 ZBTB21Q9ULJ3 1066 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 ZMYM2Q9UBW7 1377 aa8.46□□□□□ -1.06
CXCR4-201ENST00000241393 SCO2A0A1W2PP80 73 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 CCDC188H7C350 402 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 MAFKO60675 156 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 HSF2BPO75031 334 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 RASGRP1O95267 797 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 FTCDO95954 541 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 CFBP00751 764 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 ACTN1P12814 892 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 SNRPFP62306 86 aaKnown RBP8.45□□□□□ -1.06
CXCR4-201ENST00000241393 EZH2Q15910 746 aaKnown RBP8.45□□□□□ -1.06
CXCR4-201ENST00000241393 TCERG1LQ5VWI1 586 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 ZCCHC8Q6NZY4 707 aaKnown RBP8.45□□□□□ -1.06
CXCR4-201ENST00000241393 EP400NLQ6ZTU2 488 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 CEP68Q76N32 757 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 ZNF720Q7Z2F6 126 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 FAM83AQ86UY5 434 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 KIF18BQ86Y91 864 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 CD302Q8IX05 232 aa8.45□□□□□ -1.06
CXCR4-201ENST00000241393 C12orf56Q8IXR9 622 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms