RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SKIV2L2P42285 1042 aaKnown RBP23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 GPX6P59796 221 aa23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 ARHGAP1Q07960 439 aa23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 EMC1Q8N766 993 aa23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 GTF3C2Q8WUA4 911 aaPredicted RBP23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 HEXIM2Q96MH2 286 aaKnown RBP23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 DHRS4Q9BTZ2 278 aa23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 ACSS3Q9H6R3 686 aa23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 EVPLQ92817 2033 aa23.02■■□□□ 1.28
SMARCD2-201ENST00000225742 ATP2A2P16615 1042 aaKnown RBP23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 NCALDP61601 193 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 MOGSQ13724 837 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 PDK4Q16654 411 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 KCNT1Q5JUK3 1230 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 CGB2Q6NT52 195 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 LCLAT1Q6UWP7 414 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 PDIK1LQ8N165 341 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 ZNF668Q96K58 619 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 MAK16Q9BXY0 300 aaKnown RBP23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 CLUHO75153 1309 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 MCM3APO60318 1980 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 ZWINTO95229 277 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 LGALS2P05162 132 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 SLC8A1P32418 973 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 GDF10P55107 478 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 ZKSCAN8Q15776 578 aaPredicted RBP23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 SLC10A6Q3KNW5 377 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 ADGRD1Q6QNK2 874 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 ALKBH8Q96BT7 664 aaKnown RBP23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 CLMNQ96JQ2 1002 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 NCAPGQ9BPX3 1015 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 ECT2Q9H8V3 914 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 PCSK1NQ9UHG2 260 aa23.01■■□□□ 1.27
SMARCD2-201ENST00000225742 A0A087WZ62 844 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 A0A1B0GUA9 196 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 TYROBPO43914 113 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 SPAG7O75391 227 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 NQO1P15559 274 aaKnown RBP23■■□□□ 1.27
SMARCD2-201ENST00000225742 GBP2P32456 591 aaPredicted RBP23■■□□□ 1.27
SMARCD2-201ENST00000225742 RNASELQ05823 741 aaKnown RBP23■■□□□ 1.27
SMARCD2-201ENST00000225742 FAM102AQ5T9C2 384 aaPredicted RBP23■■□□□ 1.27
SMARCD2-201ENST00000225742 DLK2Q6UY11 383 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 VSIG1Q86XK7 387 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 NLGN2Q8NFZ4 835 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 AFG1LQ8WV93 481 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 USP6NLQ92738 828 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 FDXACB1Q9BRP7 624 aaPredicted RBP23■■□□□ 1.27
SMARCD2-201ENST00000225742 PDGFCQ9NRA1 345 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 HMGXB4Q9UGU5 601 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 AGAP1Q9UPQ3 857 aa23■■□□□ 1.27
SMARCD2-201ENST00000225742 SBF1O95248 1867 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 C2CD4BA6NLJ0 364 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 DPYSL4O14531 572 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 ROR1Q01973 937 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 SF3A3Q12874 501 aaKnown RBP eCLIP22.99■■□□□ 1.276e-6■□□□□ 10.9
SMARCD2-201ENST00000225742 DPYSL3Q14195 570 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 PDK2Q15119 407 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 NOMO1Q15155 1222 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 FNBP1LQ5T0N5 605 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 ANKRD22Q5VYY1 191 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 ILDR2Q71H61 639 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 ANKMY2Q8IV38 441 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 UNC45BQ8IWX7 931 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 HSPH1Q92598 858 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 EMID1Q96A84 441 aaPredicted RBP22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 PAIP2Q9BPZ3 127 aaKnown RBP22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 FRMD8Q9BZ67 464 aaPredicted RBP22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 VTA1Q9NP79 307 aa22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 SAE1Q9UBE0 346 aaPredicted RBP22.99■■□□□ 1.27
SMARCD2-201ENST00000225742 RBM47A0AV96 593 aaKnown RBP22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 SPAG6O75602 509 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 CD48P09326 243 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 SETSIPP0DME0 302 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 RBP3P10745 1247 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 CA4P22748 312 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 IGBP1P78318 339 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 HP1BP3Q5SSJ5 553 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 HHATQ5VTY9 493 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 ARMCX2Q7L311 632 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 MAP7D3Q8IWC1 876 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 PALM2Q8IXS6 379 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 ACAP3Q96P50 834 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 DPP3Q9NY33 737 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 XPO7Q9UIA9 1087 aaKnown RBP22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 AKT3Q9Y243 479 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 GOLGA8MH3BSY2 632 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 ATP5HO75947 161 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 DDNO94850 711 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 ARF4P18085 180 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 SNX16P57768 344 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 ORC1Q13415 861 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 C3orf62Q6ZUJ4 267 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 APBB1IPQ7Z5R6 666 aaPredicted RBP22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 FBXO36Q8NEA4 188 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 PPTC7Q8NI37 304 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 SPATA18Q8TC71 538 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 LRRC8CQ8TDW0 803 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 NT5C1AQ9BXI3 368 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 CALN1Q9BXU9 219 aa22.98■■□□□ 1.27
SMARCD2-201ENST00000225742 DERAQ9Y315 318 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms