RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 SIX1Q15475 284 aaPredicted RBP8.74□□□□□ -1.01
PNKP-231ENST00000640501 KRT71Q3SY84 523 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 EFHC1Q5JVL4 640 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 AADACL2Q6P093 401 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 TTC27Q6P3X3 843 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 C4orf22Q6V702 233 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 KDM7AQ6ZMT4 941 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 CRYBG2Q8N1P7 616 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 TMEM86AQ8N2M4 240 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 SPATA18Q8TC71 538 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 FBXO25Q8TCJ0 367 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
PNKP-231ENST00000640501 HSFY1Q96LI6 401 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 TTC25Q96NG3 672 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 CPXM1Q96SM3 734 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 APOL6Q9BWW8 343 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 EIF2AQ9BY44 585 aaKnown RBP8.74□□□□□ -1.01
PNKP-231ENST00000640501 TRIM7Q9C029 511 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 SDCBP2Q9H190 292 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 NXF3Q9H4D5 531 aaKnown RBP8.74□□□□□ -1.01
PNKP-231ENST00000640501 PPCSQ9HAB8 311 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 TMBIM4Q9HC24 238 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 XPNPEP3Q9NQH7 507 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 ZDHHC18Q9NUE0 388 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 CALCOCO1Q9P1Z2 691 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 NOD1Q9Y239 953 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 NR2E1Q9Y466 385 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 IPPQ9Y573 584 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 SQORQ9Y6N5 450 aa8.74□□□□□ -1.01
PNKP-231ENST00000640501 CFAP69A5D8W1 941 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 ZNF487B1APH4 448 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 F8VP50 259 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 DPYSL4O14531 572 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 MCF2LO15068 1137 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 LIASO43766 372 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 LRCH4O75427 683 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 IGHA2P01877 340 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 THP07101 528 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 PDGFRAP16234 1089 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 ZFXP17010 805 aaPredicted RBP8.73□□□□□ -1.01
PNKP-231ENST00000640501 WARSP23381 471 aaKnown RBP8.73□□□□□ -1.01
PNKP-231ENST00000640501 LRPAP1P30533 357 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 RPL9P32969 192 aaKnown RBP8.73□□□□□ -1.01
PNKP-231ENST00000640501 CDKN2BP42772 138 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 LHX1P48742 406 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 VCPP55072 806 aaKnown RBP8.73□□□□□ -1.01
PNKP-231ENST00000640501 SKOR1P84550 965 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 SLC6A3Q01959 620 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 KRT81Q14533 505 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 EMC10Q5UCC4 262 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 KAZNQ674X7 775 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 PPP1R21Q6ZMI0 780 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 BZW1Q7L1Q6 419 aaKnown RBP8.73□□□□□ -1.01
PNKP-231ENST00000640501 RNF180Q86T96 592 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 TMEM110Q86TL2 294 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 ACOT1Q86TX2 421 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 CCDC25Q86WR0 208 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 ADGRF2Q8IZF7 708 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 CNPY4Q8N129 248 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 ANKRD52Q8NB46 1076 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 TEKT4Q8WW24 435 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 RSAD2Q8WXG1 361 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 NKD2Q969F2 451 aaPredicted RBP8.73□□□□□ -1.01
PNKP-231ENST00000640501 PGM2Q96G03 612 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 TMEM109Q9BVC6 243 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 TRIM62Q9BVG3 475 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 HEMGNQ9BXL5 484 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 SEZ6LQ9BYH1 1024 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 PHACTR1Q9C0D0 580 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 FAM107BQ9H098 131 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 PCDH9Q9HC56 1237 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 TMEM51Q9NW97 253 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 GRHL1Q9NZI5 618 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 TUBGCP4Q9UGJ1 667 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 USP18Q9UMW8 372 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 GIT1Q9Y2X7 761 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 CDY2AQ9Y6F7 541 aa8.73□□□□□ -1.01
PNKP-231ENST00000640501 FAM155AB1AL88 458 aaPredicted RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 E5RJQ4 531 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 APOC4-APOC2K7ER74 178 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 SGK1O00141 431 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 RGS16O15492 202 aaPredicted RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 SHOX2O60902 331 aaPredicted RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 TRUB2O95900 331 aaKnown RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 AGTP01019 485 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 APOC2P02655 101 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 ATP2A2P16615 1042 aaKnown RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 KDELR1P24390 212 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 AKAP5P24588 427 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 CST5P28325 142 aaPredicted RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 STIP1P31948 543 aaKnown RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 PTPN9P43378 593 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 KCNJ1P48048 391 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 FLT3LGP49771 235 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 SLC25A11Q02978 314 aaKnown RBP8.72□□□□□ -1.01
PNKP-231ENST00000640501 ZNF844Q08AG5 666 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 MORF4L2Q15014 288 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 TRADDQ15628 312 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 NBPF20Q3BBV1 942 aa8.72□□□□□ -1.01
PNKP-231ENST00000640501 PPP1R26Q5T8A7 1209 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms