RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 ARHGAP17Q68EM7 881 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 CES5AQ6NT32 575 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 VSTM1Q6UX27 236 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 RTL10Q7L3V2 364 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 GRASPQ7Z6J2 395 aaPredicted RBP14.01□□□□□ -0.17
GTF3A-209ENST00000640289 KCNK16Q96T55 309 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 SMOQ99835 787 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 ANP32EQ9BTT0 268 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 STK33Q9BYT3 514 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 PIDD1Q9HB75 910 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 KRT82Q9NSB4 513 aa14.01□□□□□ -0.17
GTF3A-209ENST00000640289 DNMT3BQ9UBC3 853 aaKnown RBP14.01□□□□□ -0.17
GTF3A-209ENST00000640289 ATP8B3O60423 1300 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 A0A1W2PQC6 194 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 F8VZ95 297 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 CYP26A1O43174 497 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 XYLBO75191 536 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 CLCN1P35523 988 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 EPHB3P54753 998 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 RPL10AP62906 217 aaKnown RBP14□□□□□ -0.17
GTF3A-209ENST00000640289 PLD1Q13393 1074 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 GOLGA7BQ2TAP0 167 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 ATAT1Q5SQI0 421 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 PTCRAQ6ISU1 281 aaPredicted RBP14□□□□□ -0.17
GTF3A-209ENST00000640289 CLEC20AQ6ZU45 233 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 HS6ST3Q8IZP7 471 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 ZMIZ2Q8NF64 920 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 SUSD6Q92537 303 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 SMARCD1Q96GM5 515 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 ZNF512Q96ME7 567 aaPredicted RBP14□□□□□ -0.17
GTF3A-209ENST00000640289 CORO1BQ9BR76 489 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 DNAI2Q9GZS0 605 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 TSPAN16Q9UKR8 245 aa14□□□□□ -0.17
GTF3A-209ENST00000640289 REV3LO60673 3130 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 O00370 1275 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 NRG2O14511 850 aaPredicted RBP13.99□□□□□ -0.17
GTF3A-209ENST00000640289 TRIM66O15016 1216 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 POU2F2P09086 479 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 FAM200BP0CF97 657 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 IL9P15248 144 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 PTPN2P17706 415 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 ANXA13P27216 316 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 GNA15P30679 374 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 MAP3K7CLP57077 242 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 JAM2P57087 298 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 CBX2Q14781 532 aaPredicted RBP13.99□□□□□ -0.17
GTF3A-209ENST00000640289 DNAJB7Q7Z6W7 309 aaPredicted RBP13.99□□□□□ -0.17
GTF3A-209ENST00000640289 TTC30AQ86WT1 665 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 FAM71AQ8IYT1 594 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 ELMOD1Q8N336 334 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 PSMG2Q969U7 264 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 C8orf48Q96LL4 319 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 RIPOR3Q96MK2 946 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 SPAG5Q96R06 1193 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 POMKQ9H5K3 350 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 ZNF334Q9HCZ1 680 aaPredicted RBP13.99□□□□□ -0.17
GTF3A-209ENST00000640289 DMAP1Q9NPF5 467 aaPredicted RBP13.99□□□□□ -0.17
GTF3A-209ENST00000640289 MAGED2Q9UNF1 606 aaPredicted RBP13.99□□□□□ -0.17
GTF3A-209ENST00000640289 EYSQ5T1H1 3165 aa13.99□□□□□ -0.17
GTF3A-209ENST00000640289 SLC38A8A6NNN8 435 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 THAP12O43422 761 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 CBFA2T2O43439 604 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 GFPT2O94808 682 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 RHOP08100 348 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 CFHP08603 1231 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 HMGA1P17096 107 aaKnown RBP13.98□□□□□ -0.17
GTF3A-209ENST00000640289 MTHFRP42898 656 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 USP46P62068 366 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 VEPH1Q14D04 833 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 SMAD2Q15796 467 aaKnown RBP13.98□□□□□ -0.17
GTF3A-209ENST00000640289 SLC5A9Q2M3M2 681 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 PABPC1LQ4VXU2 614 aaKnown RBP13.98□□□□□ -0.17
GTF3A-209ENST00000640289 CYP26C1Q6V0L0 522 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 CACNA2D4Q7Z3S7 1137 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 SLC47A2Q86VL8 602 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 TMC8Q8IU68 726 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 UBA3Q8TBC4 463 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 TCEAL4Q96EI5 215 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 LRRC3Q9BY71 257 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 DUSP16Q9BY84 665 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 TTYH3Q9C0H2 523 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 CSNK1G1Q9HCP0 422 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 WDR6Q9NNW5 1121 aaKnown RBP13.98□□□□□ -0.17
GTF3A-209ENST00000640289 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.98□□□□□ -0.17
GTF3A-209ENST00000640289 DAAM1Q9Y4D1 1078 aa13.98□□□□□ -0.17
GTF3A-209ENST00000640289 CLUHO75153 1309 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 HHLA1C9JL84 531 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 TULP2O00295 520 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 MICAL2O94851 1124 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 TPM3P06753 285 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 CSH1P0DML2 217 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 CSH2P0DML3 217 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 MYL4P12829 197 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 GJA1P17302 382 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 NPR3P17342 541 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 SP100P23497 879 aaPredicted RBP13.97□□□□□ -0.17
GTF3A-209ENST00000640289 SOX5P35711 763 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 CCR2P41597 374 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 MRPS5P82675 430 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms