RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
LINC00339-207ENST00000634712 F11P03951 625 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 DDX6P26196 483 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC00339-207ENST00000634712 AVPR1AP37288 418 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 ASPAP45381 313 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 NDST1P52848 882 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 STX17P56962 302 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 MCCD1P59942 119 aaPredicted RBP16.7■□□□□ 0.26
LINC00339-207ENST00000634712 SLC44A4Q53GD3 710 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 FRMD5Q7Z6J6 570 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 ACOT1Q86TX2 421 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 GPIHBP1Q8IV16 184 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 MFSD6LQ8IWD5 586 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 TRMT2BQ96GJ1 504 aaKnown RBP16.7■□□□□ 0.26
LINC00339-207ENST00000634712 MYRFLQ96LU7 910 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 PRRX2Q99811 253 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 NIF3L1Q9GZT8 377 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 KCNH6Q9H252 994 aa16.7■□□□□ 0.26
LINC00339-207ENST00000634712 APOBEC3GQ9HC16 384 aaKnown RBP16.7■□□□□ 0.26
LINC00339-207ENST00000634712 F8VP50 259 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 CLDN5O00501 218 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 ZNF263O14978 683 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 GDI1P31150 447 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 VCPP55072 806 aaKnown RBP16.69■□□□□ 0.26
LINC00339-207ENST00000634712 TTI2Q6NXR4 508 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 FOXR2Q6PJQ5 311 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 VITQ6UXI7 678 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 DENND5BQ6ZUT9 1274 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 MAB21L3Q8N8X9 362 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 IRF7Q92985 503 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 C8orf48Q96LL4 319 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 DUSP9Q99956 384 aaKnown RBP16.69■□□□□ 0.26
LINC00339-207ENST00000634712 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 BCO2Q9BYV7 579 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 ZNF518BQ9C0D4 1074 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 CLSTN2Q9H4D0 955 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 ARIH1Q9Y4X5 557 aaPredicted RBP16.69■□□□□ 0.26
LINC00339-207ENST00000634712 ZDBF2Q9HCK1 2354 aa16.69■□□□□ 0.26
LINC00339-207ENST00000634712 SOBPA7XYQ1 873 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 GNA14O95837 355 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 NPR3P17342 541 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 CD58P19256 250 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 WEE1P30291 646 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 PRKCQQ04759 706 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 CETN1Q12798 172 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 ORC1Q13415 861 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 MLF2Q15773 248 aaPredicted RBP16.68■□□□□ 0.26
LINC00339-207ENST00000634712 TXNDC8Q6A555 127 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 CMTM8Q8IZV2 173 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 CRYBG2Q8N1P7 616 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 SEMA4DQ92854 862 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 FAXDC2Q96IV6 333 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 NT5C1AQ9BXI3 368 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 SRRTQ9BXP5 876 aaKnown RBP16.68■□□□□ 0.26
LINC00339-207ENST00000634712 TBC1D17Q9HA65 648 aa16.68■□□□□ 0.26
LINC00339-207ENST00000634712 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 PHLDB3Q6NSJ2 640 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 TMEM150AQ86TG1 271 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 MON1AQ86VX9 555 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 CELF5Q8N6W0 485 aaKnown RBP16.67■□□□□ 0.26
LINC00339-207ENST00000634712 CSGALNACT1Q8TDX6 532 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 DNASE1L2Q92874 299 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 SLC35C1Q96A29 364 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 SMARCD1Q96GM5 515 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 NUP62CLQ9H1M0 184 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 TRPC7Q9HCX4 862 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 THG1LQ9NWX6 298 aaKnown RBP16.67■□□□□ 0.26
LINC00339-207ENST00000634712 OBP2AQ9NY56 170 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 TRPM5Q9NZQ8 1165 aa16.67■□□□□ 0.26
LINC00339-207ENST00000634712 LRRN2O75325 713 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 AP1G2O75843 785 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 CCDC192P0DO97 292 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 AOC1P19801 751 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 NUBP1P53384 320 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 STARD6P59095 220 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 INCA1Q0VD86 236 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 IFRD2Q12894 506 aaPredicted RBP16.66■□□□□ 0.26
LINC00339-207ENST00000634712 IER5LQ5T953 404 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 CWF19L1Q69YN2 538 aaKnown RBP16.66■□□□□ 0.26
LINC00339-207ENST00000634712 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 CREBRFQ8IUR6 639 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 NUP93Q8N1F7 819 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 TMEM105Q8N8V8 129 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 MLKLQ8NB16 471 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 SLC2A14Q8TDB8 520 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 BPIFB1Q8TDL5 484 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 DMAP1Q9NPF5 467 aaPredicted RBP16.66■□□□□ 0.26
LINC00339-207ENST00000634712 LMBRD1Q9NUN5 540 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 FAM49BQ9NUQ9 324 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 HMGXB4Q9UGU5 601 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 RWDD2AQ9UIY3 292 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 SIT1Q9Y3P8 196 aa16.66■□□□□ 0.26
LINC00339-207ENST00000634712 TRAV19A0A0A6YYK7 116 aa16.65■□□□□ 0.26
LINC00339-207ENST00000634712 CHADO15335 359 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms