RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 CAMKK1Q8N5S9 505 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 KCTD17Q8N5Z5 321 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 OSBP2Q969R2 916 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 EVA1BQ9NVM1 165 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 APEX2Q9UBZ4 518 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 HERC5Q9UII4 1024 aaKnown RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ABCA10Q8WWZ4 1543 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ANKRD65E5RJM6 399 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 H7C4K7 107 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 EIF3HO15372 352 aaKnown RBP eCLIP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 CYP26A1O43174 497 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 STAG3L1P0CL83 205 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TSC22D1Q15714 1073 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 NDUFAF6Q330K2 333 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 TIGD7Q6NT04 549 aaPredicted RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF589Q86UQ0 364 aaPredicted RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PPIL6Q8IXY8 311 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PHACTR4Q8IZ21 702 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF669Q96BR6 464 aaPredicted RBP9.26□□□□□ -0.93
GABRB3-216ENST00000628124 NAT9Q9BTE0 207 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 PADI4Q9UM07 663 aa9.26□□□□□ -0.93
GABRB3-216ENST00000628124 DYNC1LI2O43237 492 aaPredicted RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 UQCRBP14927 111 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 GPD1P21695 349 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 POU1F1P28069 291 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 NUDT2P50583 147 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 GYS2P54840 703 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ZCWPW2Q504Y3 356 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SYTL1Q8IYJ3 562 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 CCT8L2Q96SF2 557 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 APOL4Q9BPW4 351 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 CEP44Q9C0F1 390 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 NMRK2Q9NPI5 230 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ASNA1O43681 348 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 MGRN1O60291 552 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 MAGEA4P43358 317 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 MAD2L1Q13257 205 aaPredicted RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 PKP1Q13835 747 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 RCN1Q15293 331 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 LAYNQ6UX15 382 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 CASP12Q6UXS9 341 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 C3orf62Q6ZUJ4 267 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 GSPT2Q8IYD1 628 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 IL17REQ8NFR9 667 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SEPT1Q8WYJ6 367 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 BCL2L14Q9BZR8 327 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SEC31BQ9NQW1 1179 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SH3BP4Q9P0V3 963 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SNX12Q9UMY4 172 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 DRG1Q9Y295 367 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 RPS6KA5O75582 802 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 GH1P01241 217 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 RARBP10826 455 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 IRF1P10914 325 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 YWHABP31946 246 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 STIP1P31948 543 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 NCOA4Q13772 614 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 PDIA5Q14554 519 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 TSNQ15631 228 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ATP6AP1LQ52LC2 224 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 BOLA3Q53S33 107 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 C12orf60Q5U649 245 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 C1orf131Q8NDD1 294 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ENKURQ8TC29 256 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SENP2Q9HC62 589 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ATP6V1HQ9UI12 483 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ANAPC2Q9UJX6 822 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 TMEM114B3SHH9 223 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 MUTP22033 750 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ARHGDIBP52566 201 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 PTPN12Q05209 780 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 BTKQ06187 659 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 DDX39BQ13838 428 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 CHI3L2Q15782 390 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SLC18A3Q16572 532 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 DDR2Q16832 855 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 USP17L6PQ6QN14 398 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 DHX40Q8IX18 779 aaKnown RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 C4orf33Q8N1A6 199 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ATG16L2Q8NAA4 619 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 RBBP8NLQ8NC74 664 aaPredicted RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SETD9Q8NE22 299 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 SPATA18Q8TC71 538 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 INTS13Q9NVM9 706 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 BARHL2Q9NY43 387 aa9.25□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF335Q9H4Z2 1342 aaPredicted RBP9.25□□□□□ -0.93
GABRB3-216ENST00000628124 TTC26A0AVF1 554 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 RBP1P09455 135 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 SERPINB8P50452 374 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 GEMIN4P57678 1058 aaKnown RBP9.24□□□□□ -0.93
GABRB3-216ENST00000628124 EPS8Q12929 822 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 DGKKQ5KSL6 1271 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 C10orf120Q5SQS8 335 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 CYP4A22Q5TCH4 519 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 POTEGQ6S5H5 508 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 COLEC11Q9BWP8 271 aa9.24□□□□□ -0.93
GABRB3-216ENST00000628124 MIEF1Q9NQG6 463 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms