RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SGPL1O95470 568 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 CD46P15529 392 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 MPSTP25325 297 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 KAZNQ674X7 775 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TAPT1Q6NXT6 567 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 PHLDB2Q86SQ0 1253 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 PALB2Q86YC2 1186 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 CEP120Q8N960 986 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TMEM161BQ8NDZ6 487 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 PSPC1Q8WXF1 523 aaKnown RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 NLRP4Q96MN2 994 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 PPP1R16BQ96T49 567 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TRIM55Q9BYV6 548 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 C1orf112Q9NSG2 853 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 RAB20Q9NX57 234 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 GINS2Q9Y248 185 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 HBP1O60381 514 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 TOMM70O94826 608 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNF286BP0CG31 522 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 RGS2P41220 211 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 GTF2BQ00403 316 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 TMEM154Q6P9G4 183 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ZC3H18Q86VM9 953 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 RHPN2Q8IUC4 686 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 PRPF31Q8WWY3 499 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNF570Q96NI8 536 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 TMEM237Q96Q45 408 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 POP1Q99575 1024 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 NIFKQ9BYG3 293 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 MYLK2Q9H1R3 596 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 LRRC19Q9H756 370 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 WDR91A4D1P6 747 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 NVLO15381 856 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 GYG2O15488 501 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 HAUS5O94927 633 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ZWINTO95229 277 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 MAGEA4P43358 317 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 PSMC4P43686 418 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 POLE2P56282 527 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ARHGAP1Q07960 439 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 BLMHQ13867 455 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 DEFB115Q30KQ5 88 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 BRDTQ58F21 947 aaPredicted RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 C17orf99Q6UX52 265 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 APLFQ8IW19 511 aaPredicted RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 C4orf33Q8N1A6 199 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 PDCD7Q8N8D1 485 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 RNF149Q8NC42 400 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ASAP3Q8TDY4 903 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 RMDN2Q96LZ7 410 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 FOXP3Q9BZS1 431 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 RNPEPQ9H4A4 650 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 NINJ2Q9NZG7 142 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 HSPBP1Q9NZL4 362 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ANKFY1Q9P2R3 1169 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 IGKV6D-21A0A0A0MT36 114 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 A0A0G2JND7 137 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 TCRBV7S2A1N4TA0A589 114 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ANKRD63C9JTQ0 380 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 INO80B-WBP1J3KQ70 363 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 AOC2O75106 756 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 LGALS2P05162 132 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 INSRRP14616 1297 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 CREB1P16220 341 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 SMPD1P17405 629 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 GLRA2P23416 452 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 SLC1A1P43005 524 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 HADHBP55084 474 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 NCKAP1LP55160 1127 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 CENPCQ03188 943 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 CCL14Q16627 93 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 IQSEC1Q6DN90 963 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 EFCAB12Q6NXP0 572 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 TMEM92Q6UXU6 159 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 CENPUQ71F23 418 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 PLPPR4Q7Z2D5 763 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ZBTB8OSQ8IWT0 167 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 FNBP1Q96RU3 617 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 INO80BQ9C086 356 aaPredicted RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 AP5M1Q9H0R1 490 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 EPB41L4BQ9H329 900 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 DHX33Q9H6R0 707 aaKnown RBP7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 UBN1Q9NPG3 1134 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 CHKAP35790 457 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 SLC26A2P50443 739 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 CLCN3P51790 818 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 BPIFB4P59827 614 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 CCDC15Q0P6D6 951 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 NOGQ13253 232 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 PARP6Q2NL67 630 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 DUSP28Q4G0W2 176 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 KRT39Q6A163 491 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 VSTM1Q6UX27 236 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 ARHGEF19Q8IW93 802 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 TEKT4Q8WW24 435 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 INPP5DQ92835 1189 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 DCLRE1BQ9H816 532 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 NPHS2Q9NP85 383 aa7.33□□□□□ -1.24
SRGAP3-213ENST00000618999 DLGAP2Q9P1A6 1054 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms