RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 VSTM1Q6UX27 236 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 CMTM8Q8IZV2 173 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 FMR1NBQ8N0W7 255 aaPredicted RBP23.35■■□□□ 1.33
TRAF4-217ENST00000618771 MAB21L3Q8N8X9 362 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 MYCBPAPQ8TBZ2 947 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 CSGALNACT1Q8TDX6 532 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 MRPS31Q92665 395 aaKnown RBP23.35■■□□□ 1.33
TRAF4-217ENST00000618771 TRMT2BQ96GJ1 504 aaKnown RBP23.35■■□□□ 1.33
TRAF4-217ENST00000618771 PCED1BQ96HM7 432 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 MYRFLQ96LU7 910 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 LRRC3BQ96PB8 259 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 PIAS3Q9Y6X2 628 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 CEP250Q9BV73 2442 aa23.35■■□□□ 1.33
TRAF4-217ENST00000618771 HELZP42694 1942 aaKnown RBP23.35■■□□□ 1.33
TRAF4-217ENST00000618771 MAN2B1O00754 1011 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 BDNFP23560 247 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 NR2F2P24468 414 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 DDX6P26196 483 aaKnown RBP eCLIP23.34■■□□□ 1.335e-6■□□□□ 11.1
TRAF4-217ENST00000618771 ARHGAP29Q52LW3 1261 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 ZNF667Q5HYK9 610 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 MDH1BQ5I0G3 518 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 BPIFB1Q8TDL5 484 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 SMG9Q9H0W8 520 aaKnown RBP23.34■■□□□ 1.33
TRAF4-217ENST00000618771 SMYD3Q9H7B4 428 aa23.34■■□□□ 1.33
TRAF4-217ENST00000618771 MAPK13O15264 365 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 NCAM2O15394 837 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 TADA3O75528 432 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 VNN1O95497 513 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 AVPR1AP37288 418 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 MAGEA9P43362 315 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 PNOCQ13519 176 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 ZACNQ401N2 412 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 CELF5Q8N6W0 485 aaKnown RBP23.33■■□□□ 1.33
TRAF4-217ENST00000618771 DPEP3Q9H4B8 488 aa23.33■■□□□ 1.33
TRAF4-217ENST00000618771 DNAH14Q0VDD8 3507 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 GPR179Q6PRD1 2367 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 SOBPA7XYQ1 873 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 A8MXQ7 604 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 IKBKBO14920 756 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 PTPN1P18031 435 aaKnown RBP23.32■■□□□ 1.32
TRAF4-217ENST00000618771 RPL13P26373 211 aaKnown RBP23.32■■□□□ 1.32
TRAF4-217ENST00000618771 ANXA13P27216 316 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 GRIK1P39086 918 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 VAMP7P51809 220 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 TXNDC8Q6A555 127 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 MON1AQ86VX9 555 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 MAML2Q8IZL2 1156 aaPredicted RBP23.32■■□□□ 1.32
TRAF4-217ENST00000618771 DCLK2Q8N568 766 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 FAM3CQ92520 227 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 RUBCNQ92622 972 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 CLDN23Q96B33 292 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 ZFYVE19Q96K21 471 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 SPATA17Q96L03 361 aa23.32■■□□□ 1.32
TRAF4-217ENST00000618771 SPATA6Q9NWH7 488 aaPredicted RBP23.32■■□□□ 1.32
TRAF4-217ENST00000618771 NDRG2Q9UN36 371 aaKnown RBP23.32■■□□□ 1.32
TRAF4-217ENST00000618771 TRIM66O15016 1216 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 AKAP3O75969 853 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 RAP1GAPP47736 663 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 MLLT6P55198 1093 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-217ENST00000618771 FAM160A1Q05DH4 1040 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 ZCWPW2Q504Y3 356 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 C1orf220Q5T0J3 134 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 SCARA5Q6ZMJ2 495 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 INTS8Q75QN2 995 aaKnown RBP23.31■■□□□ 1.32
TRAF4-217ENST00000618771 SV2AQ7L0J3 742 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 DGLUCYQ7Z3D6 616 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 SMYD4Q8IYR2 804 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-217ENST00000618771 B3GALNT2Q8NCR0 500 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 ENGASEQ8NFI3 743 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 ELMO3Q96BJ8 720 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 MSANTD3Q96H12 275 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 CEP295NLQ96MC4 621 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 RMND1Q9NWS8 449 aa23.31■■□□□ 1.32
TRAF4-217ENST00000618771 RPS9P46781 194 aaKnown RBP23.3■■□□□ 1.32
TRAF4-217ENST00000618771 KPNA1P52294 538 aaPredicted RBP23.3■■□□□ 1.32
TRAF4-217ENST00000618771 CDH8P55286 799 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 PLCB2Q00722 1185 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 ADAM9Q13443 819 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 SGSM1Q2NKQ1 1148 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 FAM186BQ8IYM0 893 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 USP13Q92995 863 aaPredicted RBP23.3■■□□□ 1.32
TRAF4-217ENST00000618771 ELOVL4Q9GZR5 314 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 KIF9Q9HAQ2 790 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 THG1LQ9NWX6 298 aaKnown RBP23.3■■□□□ 1.32
TRAF4-217ENST00000618771 CCL26Q9Y258 94 aa23.3■■□□□ 1.32
TRAF4-217ENST00000618771 F8VP50 259 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 LAMTOR5O43504 91 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 KRT13P13646 458 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 P4HA1P13674 534 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 CCNE1P24864 410 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 PSMC2P35998 433 aaKnown RBP23.29■■□□□ 1.32
TRAF4-217ENST00000618771 PIK3CAP42336 1068 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 FZD5Q13467 585 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 EDRF1Q3B7T1 1238 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 C1orf228Q6PIY5 440 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 DENND5BQ6ZUT9 1274 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 ZNF687Q8N1G0 1237 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 TAF4BQ92750 862 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 GSDMAQ96QA5 445 aa23.29■■□□□ 1.32
TRAF4-217ENST00000618771 ZNF518BQ9C0D4 1074 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms