RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 NIFKQ9BYG3 293 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 NIF3L1Q9GZT8 377 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 DNPEPQ9ULA0 475 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ATG7O95352 703 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 CD48P09326 243 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 STX2P32856 288 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 GCLCP48506 637 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 AUHQ13825 339 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 TARBP2Q15633 366 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 P3H1Q32P28 736 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 TAOK1Q7L7X3 1001 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 EXOC3L1Q86VI1 746 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 LMNTD2Q8IXW0 634 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 TMEM35BQ8NCS4 154 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 RPS6KC1Q96S38 1066 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 NGRNQ9NPE2 291 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 METTL5Q9NRN9 209 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 HOMER3Q9NSC5 361 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 DLGAP2Q9P1A6 1054 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 HAO1Q9UJM8 370 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ZBTB42B2RXF5 422 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 AGTP01019 485 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ARF4P18085 180 aaPredicted RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 GBP1P32455 592 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ICAM3P32942 547 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 NUMBP49757 651 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ERFP50548 548 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 EFNA5P52803 228 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 BNIP1Q12981 228 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 SLMAPQ14BN4 828 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 SGSM1Q2NKQ1 1148 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ZDHHC24Q6UX98 284 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 GOLGA2P5Q9HBQ8 144 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 ZDHHC18Q9NUE0 388 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 SNTG2Q9NY99 539 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 KLHL14Q9P2G3 628 aa15.19■□□□□ 0.02
SHROOM1-208ENST00000617339 PPEF2O14830 753 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 NPTXRO95502 500 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 ASS1P00966 412 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 TGFB3P10600 412 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 KRT3P12035 628 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 PTGIRP43119 386 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 POU5F1Q01860 360 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 GPS1Q13098 491 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 PPP6R3Q5H9R7 873 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 RNF220Q5VTB9 566 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 ANO7Q6IWH7 933 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 RHOT1Q8IXI2 618 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 PGM2Q96G03 612 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 NUDCD1Q96RS6 583 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 MRPL47Q9HD33 250 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 COL11A1P12107 1806 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 PROSCO94903 275 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 GAS8O95995 478 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 CCDC142Q17RM4 750 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 NOL9Q5SY16 702 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 FAM102AQ5T9C2 384 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 PARVAQ9NVD7 372 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 ARL2BPQ9Y2Y0 163 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 C2CD2Q9Y426 696 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 PHKA2P46019 1235 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 SNRPFP62306 86 aaKnown RBP15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 C1orf127Q8N9H9 656 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 TTC8Q8TAM2 541 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 VPS37BQ9H9H4 285 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 SPC25Q9HBM1 224 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 GRHL1Q9NZI5 618 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 INPP5FQ9Y2H2 1132 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 HEY1Q9Y5J3 304 aa15.18■□□□□ 0.02
SHROOM1-208ENST00000617339 ACKR2O00590 384 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 RPS6KA3P51812 740 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 C15orf59Q2T9L4 293 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 TWF2Q6IBS0 349 aaKnown RBP15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 C15orf39Q6ZRI6 1047 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 ENOSF1Q7L5Y1 443 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 OR6B3Q8NGW1 331 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 HPDLQ96IR7 371 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 FAM167AQ96KS9 214 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 SYT15Q9BQS2 421 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 GPBP1L1Q9HC44 474 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 MAGED2Q9UNF1 606 aaPredicted RBP15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 NR2E3Q9Y5X4 410 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 LTBP3Q9NS15 1303 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 HBP1O60381 514 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 ALADP13716 330 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 ADORA2BP29275 332 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 RANBP1P43487 201 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 ARSEP51690 589 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 GTF2A2P52657 109 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 MUM1Q2TAK8 710 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 FAXCQ5TGI0 409 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 SCUBE3Q8IX30 993 aa15.17■□□□□ 0.02
SHROOM1-208ENST00000617339 C18orf25Q96B23 403 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms